EST details — SGN-E548444
| Search information |
| Request: 548444 | Match: SGN-E548444 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C190766 | Clone name: TUS-61-E4 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C88465 [cLET-8-F13] | Trace: SGN-T104518 | EST: SGN-E291122 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C190766 [TUS-61-E4] | Trace: SGN-T341671 | EST: SGN-E540796 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E548444 | Length: 555 bp (904 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E548444 [] (trimmed)
GGATGACCCAGCTAAGGGGGCAGCCAGTTTCACTGCCCAGGTCATCATCATGAACCATCCTGGCCAGATTGGAAATGGATATGCACCAGTGCTTG
ACTGCCACACTTCCCACATTGCTGTCAAGTTTGCTGAGATCTTGACCAAGATTGACAGGCGTTCAGGTAAGGAACTTGAGAAGGAGCCTAAGTTC
TTGAAGAATGGTGATGCTGGTATGGTTAAGATGATTCCCACCAAGCCCAGAAGAAGGGAAAGTAGAGTGCATTTGATGAGCACGGATGAAATAGT
TTTGTTTATTTGCATCAGTTTTTTTCATTTTTGTTTTGGACAGCATTTTGCCAGTTTTGGATATGGCTACAGAAGGTATTGTCATGGTTCTCTAG
CCTCTTTTTGAGGATAGTGGAGTAATTGAGCAATTATGTCGGGACCAAATTACTTGATGGGCAATGACATATAGCTCTGTTGGTTGTTCCTTTAC
CTGNGTTAAATCACTTTACACACAGTCTTGGTCACTGCTCAACTTATTTAAGTTTATGAAATTTTGAGTATATTTCCTTC
ACTGCCACACTTCCCACATTGCTGTCAAGTTTGCTGAGATCTTGACCAAGATTGACAGGCGTTCAGGTAAGGAACTTGAGAAGGAGCCTAAGTTC
TTGAAGAATGGTGATGCTGGTATGGTTAAGATGATTCCCACCAAGCCCAGAAGAAGGGAAAGTAGAGTGCATTTGATGAGCACGGATGAAATAGT
TTTGTTTATTTGCATCAGTTTTTTTCATTTTTGTTTTGGACAGCATTTTGCCAGTTTTGGATATGGCTACAGAAGGTATTGTCATGGTTCTCTAG
CCTCTTTTTGAGGATAGTGGAGTAATTGAGCAATTATGTCGGGACCAAATTACTTGATGGGCAATGACATATAGCTCTGTTGGTTGTTCCTTTAC
CTGNGTTAAATCACTTTACACACAGTCTTGGTCACTGCTCAACTTATTTAAGTTTATGAAATTTTGAGTATATTTCCTTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E548444] | SGN-U577204 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T349319 [Download][View] | Facility Assigned ID: TUS61E04_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.962 | Expected Error Rate: 0.0049 | Quality Trim Threshold: 12.5 |
Working
