EST details — SGN-E548447
| Search information |
| Request: 548447 | Match: SGN-E548447 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C190778 | Clone name: TUS-61-E16 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C88598 [cLET-8-M18] | Trace: SGN-T104506 | EST: SGN-E291110 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C190778 [TUS-61-E16] | Trace: SGN-T341694 | EST: SGN-E540819 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E548447 | Length: 598 bp (900 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E548447 [] (trimmed)
CAACACAAACAAAATTTCATTATATTGTCAGGTAGCACACTACATCTTTACACTGTCATCAAACGACCAGAGACTTGAGAACGTTTTAAGAGATT
CATTTTCCGGGGACAAAGTTTGTGGCGAAAGCCCAGGCATTGTTGTTTACGGGGTCTGCAAGGTGGTCAGCAAGGTTCTCCAATGGACCCTTTCC
GGTGACAATAGCTTGAACAAAGAATCCAAACATAGAGAACATAGCAAGTCTACCGTTCTTGATCTCCTTTACCTTGAGCTCAGCAAATGCCTCTG
GGTCTTCAGCAAGGCCTAATGGGTCGAAGCTGCCACCAGGGTAGAGTGGGTCGACAACCTCACCAAGAGGTCCACCAGCAATACGGTATCCCTCA
ACAGCTCCCATCAACACAACTTGGCAAGCCCAGATGGCCAAGATGCTTTGTGCATGGACCAAGCTTGGGTTGCCCAAGTAGTCAAGTCCACCTTC
ACTGAAGATCTGGGATCCGGCCTTGAACCACACAGCCTCACCGAACTTGACACCATTACGGGCCAAGAGCTCAGGGAAGACACATCCAAGAGCAC
CAAGCATAGCCCATCTGCAGTGGATCAC
CATTTTCCGGGGACAAAGTTTGTGGCGAAAGCCCAGGCATTGTTGTTTACGGGGTCTGCAAGGTGGTCAGCAAGGTTCTCCAATGGACCCTTTCC
GGTGACAATAGCTTGAACAAAGAATCCAAACATAGAGAACATAGCAAGTCTACCGTTCTTGATCTCCTTTACCTTGAGCTCAGCAAATGCCTCTG
GGTCTTCAGCAAGGCCTAATGGGTCGAAGCTGCCACCAGGGTAGAGTGGGTCGACAACCTCACCAAGAGGTCCACCAGCAATACGGTATCCCTCA
ACAGCTCCCATCAACACAACTTGGCAAGCCCAGATGGCCAAGATGCTTTGTGCATGGACCAAGCTTGGGTTGCCCAAGTAGTCAAGTCCACCTTC
ACTGAAGATCTGGGATCCGGCCTTGAACCACACAGCCTCACCGAACTTGACACCATTACGGGCCAAGAGCTCAGGGAAGACACATCCAAGAGCAC
CAAGCATAGCCCATCTGCAGTGGATCAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E548447] | SGN-U579099 | Tomato 200607 | Build 2 | 204 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T349322 [Download][View] | Facility Assigned ID: TUS61E16_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.969 | Expected Error Rate: 0.0012 | Quality Trim Threshold: 14.5 |
Working
