EST details — SGN-E548516
| Search information |
| Request: 548516 | Match: SGN-E548516 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C191021 | Clone name: TUS-61-O19 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C83314 [cLET-24-C21] | Trace: SGN-T108705 | EST: SGN-E296188 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C191021 [TUS-61-O19] | Trace: SGN-T342109 | EST: SGN-E541234 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E548516 | Length: 575 bp (901 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E548516 [] (trimmed)
AAAATGCAGGCTAGTGACAGGTTCAACATCAACTCCCAGCTTGAGCACTTACAAGCTAAATATGTTGGAACAGGACATGCCGATTTGACTAGATT
TGAGTGGGCGGTAAACATTCAGCGCGATAGCTATGCGTCCTATGTTGGGCACTATCCAATGTTGGCGTATTTTGCCATTGCAGAAAATGAATCAA
TTGGAAGAGAACGTTACAATTTTATGCAGAAAATGCTTTTGCCGTGTGGCCTTCCACCTGAAAGAGAAGATGATTAAGAGTTGCAATAAATAAAG
GCAAGATGCAAGGATCATAAACCATAGGTTTTCGTTATCTCCAGCCTCCTTACATTCTTTTCATATCATGTCAACCCTACATTGAAGTGTAAATG
GTCAGTTTGGCAGGCCATTTATGGATACTGATTAAACCTTAGGAATTATAAATCGTTTACATTTGATCACTCTATCTAAAACCTCTCTTTGTGAT
GGGTCGATTTCAATTCATCATTCTTTTTTGTTTTCTTGTATGTGTATCAAGAGCACATATAATAATTGATCAATGGGAAAGGTTAGCATTTATTT
GATGT
TGAGTGGGCGGTAAACATTCAGCGCGATAGCTATGCGTCCTATGTTGGGCACTATCCAATGTTGGCGTATTTTGCCATTGCAGAAAATGAATCAA
TTGGAAGAGAACGTTACAATTTTATGCAGAAAATGCTTTTGCCGTGTGGCCTTCCACCTGAAAGAGAAGATGATTAAGAGTTGCAATAAATAAAG
GCAAGATGCAAGGATCATAAACCATAGGTTTTCGTTATCTCCAGCCTCCTTACATTCTTTTCATATCATGTCAACCCTACATTGAAGTGTAAATG
GTCAGTTTGGCAGGCCATTTATGGATACTGATTAAACCTTAGGAATTATAAATCGTTTACATTTGATCACTCTATCTAAAACCTCTCTTTGTGAT
GGGTCGATTTCAATTCATCATTCTTTTTTGTTTTCTTGTATGTGTATCAAGAGCACATATAATAATTGATCAATGGGAAAGGTTAGCATTTATTT
GATGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E548516] | SGN-U571775 | Tomato 200607 | Build 2 | 7 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T349391 [Download][View] | Facility Assigned ID: TUS61O19_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.963 | Expected Error Rate: 0.0014 | Quality Trim Threshold: 12.5 |
Working
