EST details — SGN-E548516

Search information 
Request: 548516Match: SGN-E548516
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C191021Clone name: TUS-61-O19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C83314 [cLET-24-C21] Trace: SGN-T108705 EST: SGN-E296188 Direction: 5' Facility: TIGR
Clone: SGN-C191021 [TUS-61-O19] Trace: SGN-T342109 EST: SGN-E541234 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E548516Length: 575 bp (901 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E548516 [] (trimmed) AAAATGCAGGCTAGTGACAGGTTCAACATCAACTCCCAGCTTGAGCACTTACAAGCTAAATATGTTGGAACAGGACATGCCGATTTGACTAGATT
TGAGTGGGCGGTAAACATTCAGCGCGATAGCTATGCGTCCTATGTTGGGCACTATCCAATGTTGGCGTATTTTGCCATTGCAGAAAATGAATCAA
TTGGAAGAGAACGTTACAATTTTATGCAGAAAATGCTTTTGCCGTGTGGCCTTCCACCTGAAAGAGAAGATGATTAAGAGTTGCAATAAATAAAG
GCAAGATGCAAGGATCATAAACCATAGGTTTTCGTTATCTCCAGCCTCCTTACATTCTTTTCATATCATGTCAACCCTACATTGAAGTGTAAATG
GTCAGTTTGGCAGGCCATTTATGGATACTGATTAAACCTTAGGAATTATAAATCGTTTACATTTGATCACTCTATCTAAAACCTCTCTTTGTGAT
GGGTCGATTTCAATTCATCATTCTTTTTTGTTTTCTTGTATGTGTATCAAGAGCACATATAATAATTGATCAATGGGAAAGGTTAGCATTTATTT
GATGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E548516] SGN-U571775 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T349391 [Download][View] Facility Assigned ID: TUS61O19_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0014 Quality Trim Threshold: 12.5