EST details — SGN-E548519

Search information 
Request: 548519Match: SGN-E548519
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C191033Clone name: TUS-61-P7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C83474 [cLET-24-N6] Trace: SGN-T108789 EST: SGN-E296272 Direction: 5' Facility: TIGR
Clone: SGN-C191033 [TUS-61-P7] Trace: SGN-T342132 EST: SGN-E541257 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E548519Length: 657 bp (905 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E548519 [] (trimmed) GACTCTAACATCATACTAGATTGCNGGAAGAAAGGATGTTTAATAAGCATCTTAAATGGCTTACATAAGATGGGCCAAGCATATAAATGAACACT
TAACTGAAATAAATTTAATCTCTATGATACTGTCGGAAACAGATTTTCTAGTTTATCTTTAGAATGTGAAAAAACAAAGATTACAGTTATTATTT
TCTGCATCCAAAACAGATTGTCAGAGATGCATCAACCCGCCAAGACTACCATAAACCTCAAGCAACTTTGTGCTGTTCCATTAATTGTGTTCAAG
TACCATGATACAGCTCGCAGCAAGCCCGCACATTAACTGTCAAGTGAGAAGTCAATCGAGTTCCAGCCACCACATTATGCAGAGGCAAAAATGAC
TGAGTACACCCCAAAGCTCCCAATGTCCTGGGACTGGTGAATGAGAAGCGGCGCGTGTTGGAACGAGTGCCGGAGATCGGAGGAGTGCGAACGCG
GTTAACGGTCGGAGATGAACGGGAAGTGGAAGCTCTAGCGACGGAAGTGAGTGATCTGGTGACGGAACCACGCCAAGCCATAGCTGCTGAATTCT
GTTGATTTCTTCCAAACACAGCAAATTGTTGGGTTTAGATTAAGGTTTAGGGTTATGTTATGGTGCTGCGCTTGACCACGAACCTGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E548519] SGN-U566437 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T349394 [Download][View] Facility Assigned ID: TUS61P07_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.985 Expected Error Rate: 0.0082 Quality Trim Threshold: 12.5