EST details — SGN-E548519
| Search information |
| Request: 548519 | Match: SGN-E548519 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C191033 | Clone name: TUS-61-P7 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C83474 [cLET-24-N6] | Trace: SGN-T108789 | EST: SGN-E296272 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C191033 [TUS-61-P7] | Trace: SGN-T342132 | EST: SGN-E541257 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E548519 | Length: 657 bp (905 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E548519 [] (trimmed)
GACTCTAACATCATACTAGATTGCNGGAAGAAAGGATGTTTAATAAGCATCTTAAATGGCTTACATAAGATGGGCCAAGCATATAAATGAACACT
TAACTGAAATAAATTTAATCTCTATGATACTGTCGGAAACAGATTTTCTAGTTTATCTTTAGAATGTGAAAAAACAAAGATTACAGTTATTATTT
TCTGCATCCAAAACAGATTGTCAGAGATGCATCAACCCGCCAAGACTACCATAAACCTCAAGCAACTTTGTGCTGTTCCATTAATTGTGTTCAAG
TACCATGATACAGCTCGCAGCAAGCCCGCACATTAACTGTCAAGTGAGAAGTCAATCGAGTTCCAGCCACCACATTATGCAGAGGCAAAAATGAC
TGAGTACACCCCAAAGCTCCCAATGTCCTGGGACTGGTGAATGAGAAGCGGCGCGTGTTGGAACGAGTGCCGGAGATCGGAGGAGTGCGAACGCG
GTTAACGGTCGGAGATGAACGGGAAGTGGAAGCTCTAGCGACGGAAGTGAGTGATCTGGTGACGGAACCACGCCAAGCCATAGCTGCTGAATTCT
GTTGATTTCTTCCAAACACAGCAAATTGTTGGGTTTAGATTAAGGTTTAGGGTTATGTTATGGTGCTGCGCTTGACCACGAACCTGC
TAACTGAAATAAATTTAATCTCTATGATACTGTCGGAAACAGATTTTCTAGTTTATCTTTAGAATGTGAAAAAACAAAGATTACAGTTATTATTT
TCTGCATCCAAAACAGATTGTCAGAGATGCATCAACCCGCCAAGACTACCATAAACCTCAAGCAACTTTGTGCTGTTCCATTAATTGTGTTCAAG
TACCATGATACAGCTCGCAGCAAGCCCGCACATTAACTGTCAAGTGAGAAGTCAATCGAGTTCCAGCCACCACATTATGCAGAGGCAAAAATGAC
TGAGTACACCCCAAAGCTCCCAATGTCCTGGGACTGGTGAATGAGAAGCGGCGCGTGTTGGAACGAGTGCCGGAGATCGGAGGAGTGCGAACGCG
GTTAACGGTCGGAGATGAACGGGAAGTGGAAGCTCTAGCGACGGAAGTGAGTGATCTGGTGACGGAACCACGCCAAGCCATAGCTGCTGAATTCT
GTTGATTTCTTCCAAACACAGCAAATTGTTGGGTTTAGATTAAGGTTTAGGGTTATGTTATGGTGCTGCGCTTGACCACGAACCTGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E548519] | SGN-U566437 | Tomato 200607 | Build 2 | 11 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T349394 [Download][View] | Facility Assigned ID: TUS61P07_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.985 | Expected Error Rate: 0.0082 | Quality Trim Threshold: 12.5 |
Working
