EST details — SGN-E548523
| Search information |
| Request: 548523 | Match: SGN-E548523 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C191047 | Clone name: TUS-61-P21 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C83559 [cLET-25-D19] | Trace: SGN-T108387 | EST: SGN-E295662 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C191047 [TUS-61-P21] | Trace: SGN-T342156 | EST: SGN-E541281 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E548523 | Length: 826 bp (907 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E548523 [] (trimmed)
GTACGCAACGAACTCAAACATTGCTATTTAAACTACAAAGTCATAACATAAGGCATTAATTAAAAAAGTCCAGTTCCATCAACTATGGAAGAGCC
TTAATTACCCTATACAGTTTAAGATAAAAGGCAGCACACAGTACTTCAGTACCCGAATATATGGTTCCACATCAGGGACTCGGAAATATAAACAC
AACTACAAGAATAAAAGAGAGGCCCTTCTTCCTATTGGACAGCAAGCGAACAGAGAACACCTCAGCGACGATTCATTTGAGGTTTCTCAAGTCCT
CCCCGTGAAGCTGAAGCAGCACCATACAAAGGACCCCTGTCAGCAGCACCCATATGGACCCCATATCCCTCGCCATAAGGTGCAGGGAAACTTGC
ATCATGTCTTCCATATCTCATCCCATATGATCCACCTGCAGCCCATGCTCTACCATCAGAATTAGAAAGCTCGGCTCGTAGCTTCTCAACTTCAC
GTGCCATAGTAACCAAATTTGTCTCCATTGCCTGTCTCTGATCCATGAGTTCAATTTTTGCCTTCTTTTCATACTCAATGGCAGACCTAGCGCGC
AAAAGCTCTTGATGAAGCCCATCAATCTCACCCCTGAAATGAGGAATCTGTTGGATATCAGCTTGTAGCTTGGCAAGGTCCTTGGTGAGGGTCTG
CACCTGGCCAGTTAGATCCTGCTTCATAATATTTAGCTTCTGAACTTAACATGGAGCTGTTTAGCCTCATTTTTCAGAGGTTCTGTAGCTCGAAG
ATCTCCTTCAAGCTTTAACCTCTTTCGATAAGTTCCCTGGAGCGAATTTCATGCTCCGCTTGCATA
TTAATTACCCTATACAGTTTAAGATAAAAGGCAGCACACAGTACTTCAGTACCCGAATATATGGTTCCACATCAGGGACTCGGAAATATAAACAC
AACTACAAGAATAAAAGAGAGGCCCTTCTTCCTATTGGACAGCAAGCGAACAGAGAACACCTCAGCGACGATTCATTTGAGGTTTCTCAAGTCCT
CCCCGTGAAGCTGAAGCAGCACCATACAAAGGACCCCTGTCAGCAGCACCCATATGGACCCCATATCCCTCGCCATAAGGTGCAGGGAAACTTGC
ATCATGTCTTCCATATCTCATCCCATATGATCCACCTGCAGCCCATGCTCTACCATCAGAATTAGAAAGCTCGGCTCGTAGCTTCTCAACTTCAC
GTGCCATAGTAACCAAATTTGTCTCCATTGCCTGTCTCTGATCCATGAGTTCAATTTTTGCCTTCTTTTCATACTCAATGGCAGACCTAGCGCGC
AAAAGCTCTTGATGAAGCCCATCAATCTCACCCCTGAAATGAGGAATCTGTTGGATATCAGCTTGTAGCTTGGCAAGGTCCTTGGTGAGGGTCTG
CACCTGGCCAGTTAGATCCTGCTTCATAATATTTAGCTTCTGAACTTAACATGGAGCTGTTTAGCCTCATTTTTCAGAGGTTCTGTAGCTCGAAG
ATCTCCTTCAAGCTTTAACCTCTTTCGATAAGTTCCCTGGAGCGAATTTCATGCTCCGCTTGCATA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E548523] | SGN-U578548 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T349398 [Download][View] | Facility Assigned ID: TUS61P21_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0054 | Quality Trim Threshold: 14.5 |
Working
