EST details — SGN-E548651
| Search information |
| Request: 548651 | Match: SGN-E548651 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C191500 | Clone name: TUS-63-C18 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C92020 [cLEW-9-K11] | Trace: SGN-T112618 | EST: SGN-E298136 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C191500 [TUS-63-C18] | Trace: SGN-T342934 | EST: SGN-E542059 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E548651 | Length: 682 bp (900 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E548651 [] (trimmed)
TAATTGTATTTTTCTTTTTTCATATTTCCTTCATATTAAATGATGTAACACACTGTTTGTCTTTTTTATTTACCAATAAAATCTCACCAGTCTAA
TGTACAAAAGGAGGAGGGGAAGTATTTAATTTGGATAATATATCAAAAGTTTCTATAAACAACAAATGAATAAGTTGCAGCATCACCTTCTTTGG
AAGTTCAACCTCCCAATGAAAAATGCAAATAAAGTGGCAAAAACTAAGGGGTATGCAATCAAAACAACACCTACAATAGGTAATTGATTGTGGTG
AAATCCAAAATAGTCCCTAATAAAGGCTGCTACTGATTTCTTATCTCCAAACACAGTAATCTCTGTATCAACATCTCCATATTGTGAAGTAAGCA
TCCCATTCAACGTCCACGATGTAGGTACTAGATAATAGAACCAGATCCACCATTTTGGAATTTGAGCTTTTGGTATCAAGAATCCGGCAAAGAGG
TTGAACATTGTGTAAAAGGATGACTGGAGAATTGCAGCTACTGGCAAGTTTGGTGTCAATGAAACAAGCATCATTCCCAAGTATGTGAAGTACAA
CAATGTGCAGAACATCGAATAGAATTACCACAAAACCTTGTGGGCCGACCAAATAATATCCAATCATCGAATAAGTGATGACAGTAAATGAAAGT
GCTTGAGCTAAAAGATA
TGTACAAAAGGAGGAGGGGAAGTATTTAATTTGGATAATATATCAAAAGTTTCTATAAACAACAAATGAATAAGTTGCAGCATCACCTTCTTTGG
AAGTTCAACCTCCCAATGAAAAATGCAAATAAAGTGGCAAAAACTAAGGGGTATGCAATCAAAACAACACCTACAATAGGTAATTGATTGTGGTG
AAATCCAAAATAGTCCCTAATAAAGGCTGCTACTGATTTCTTATCTCCAAACACAGTAATCTCTGTATCAACATCTCCATATTGTGAAGTAAGCA
TCCCATTCAACGTCCACGATGTAGGTACTAGATAATAGAACCAGATCCACCATTTTGGAATTTGAGCTTTTGGTATCAAGAATCCGGCAAAGAGG
TTGAACATTGTGTAAAAGGATGACTGGAGAATTGCAGCTACTGGCAAGTTTGGTGTCAATGAAACAAGCATCATTCCCAAGTATGTGAAGTACAA
CAATGTGCAGAACATCGAATAGAATTACCACAAAACCTTGTGGGCCGACCAAATAATATCCAATCATCGAATAAGTGATGACAGTAAATGAAAGT
GCTTGAGCTAAAAGATA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E548651] | SGN-U569189 | Tomato 200607 | Build 2 | 7 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T349526 [Download][View] | Facility Assigned ID: TUS63C18_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.944 | Expected Error Rate: 0.0013 | Quality Trim Threshold: 20.5 |
Working
