EST details — SGN-E548841
| Search information |
| Request: 548841 | Match: SGN-E548841 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192169 | Clone name: TUS-64-O15 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C94537 [cLEX-4-J6] | Trace: SGN-T115908 | EST: SGN-E303971 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C192169 [TUS-64-O15] | Trace: SGN-T344087 | EST: SGN-E543212 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E548841 | Length: 775 bp (856 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E548841 [] (trimmed)
ATTTGTTGAGTTTTTTCCCTCAGGTATCTCAACTATGTCATTTTCTTATTGAATCATTGAACCCCCATAATCTGTTCCGTTTAAACAAACACTGT
TGTCTGATGTGGAACCATATTCGTGAGGGGTATTGATAGAAGATACATATGTTGTTCCTGAACTCATTAGTCCAATTGATAGTGAAAATGTTCGA
GAATAATTGTGTTTCACTTAAGTGATTTGAAGACATTAGAAAACAAATGAGATTAACACGGTTTGTGTTCATTCGTTCAATCAAAATTATTACAA
TTCGAACACAATTGGAGACATTTACAATAGAAAAGTCGATCAAAATCAACCAACAGTATTTTAAAGGAATAAATTATGGGTGGTTTAATGATGAG
GAAAAAAATCCAACTAATTTAAGGATCTGTTTATGTATTTGACCTTAATATATATATATATGTTATTAATGAGCGTAGGCATGGAGTAATGGAAG
AATATATTCACCAAGACACCAAGTGTTGATGAAAGAGGATAAGCAAAGGTATACATTGGCGTTATTCACATTCAATAAAGGAATAACAGATATAC
CTGAGGAATTGGTGGATGAAACACATCCTTTACAATACAAGCCTTTTGATAATTTTGATTTAGTTATGTACTACAGTACTGGTGCTAGCCCCATG
GCTTATGGCACTGCTAAACCTTACTGTGGTATTAATGCTCAATAGATACCTATTTTATTATAAATAATATGAGTTCAAACTAGTTTTACGATGAA
CTCTATGTGTAATTT
TGTCTGATGTGGAACCATATTCGTGAGGGGTATTGATAGAAGATACATATGTTGTTCCTGAACTCATTAGTCCAATTGATAGTGAAAATGTTCGA
GAATAATTGTGTTTCACTTAAGTGATTTGAAGACATTAGAAAACAAATGAGATTAACACGGTTTGTGTTCATTCGTTCAATCAAAATTATTACAA
TTCGAACACAATTGGAGACATTTACAATAGAAAAGTCGATCAAAATCAACCAACAGTATTTTAAAGGAATAAATTATGGGTGGTTTAATGATGAG
GAAAAAAATCCAACTAATTTAAGGATCTGTTTATGTATTTGACCTTAATATATATATATATGTTATTAATGAGCGTAGGCATGGAGTAATGGAAG
AATATATTCACCAAGACACCAAGTGTTGATGAAAGAGGATAAGCAAAGGTATACATTGGCGTTATTCACATTCAATAAAGGAATAACAGATATAC
CTGAGGAATTGGTGGATGAAACACATCCTTTACAATACAAGCCTTTTGATAATTTTGATTTAGTTATGTACTACAGTACTGGTGCTAGCCCCATG
GCTTATGGCACTGCTAAACCTTACTGTGGTATTAATGCTCAATAGATACCTATTTTATTATAAATAATATGAGTTCAAACTAGTTTTACGATGAA
CTCTATGTGTAATTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E548841] | SGN-U569662 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T349716 [Download][View] | Facility Assigned ID: TUS64O15_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.935 | Expected Error Rate: 0.0016 | Quality Trim Threshold: 14.5 |
Working
