EST details — SGN-E548847

Search information 
Request: 548847Match: SGN-E548847
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C192190Clone name: TUS-64-P12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C94605 [cLEX-4-N15] Trace: SGN-T115885 EST: SGN-E303948 Direction: 5' Facility: TIGR
Clone: SGN-C192190 [TUS-64-P12] Trace: SGN-T344123 EST: SGN-E543248 Direction: 3' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E548847Length: 341 bp (994 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E548847 [] (trimmed) GGTTGCATCCATGAAGGTGGGACTCTATGCTTCCCAGCTGGCTCAAACGGTAGTTATGTGTCTGCTGCAAAATTTGTGAAAGCAAATATAGCTTA
TATCCCTACGAACCCAGAGGATGGGTTCAAATTGACACAGAAAACAGTTGAAAGTTTTTTGAAGACCATCGACAGACCTTGGATTTTTATTTCTG
GACCAACTGTCAATCCTACTGGGCAGCTTTACAGCAATGAGGAGATAAAGAGTATATTATCTGTGTGCTCAAACTTTGGTGCTAGGGTCATAATT
GATACTTCATTTTCTGGTGTGGAATTCAACTCCAAGGGCTCTAATGGCTGGAATTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E548847] SGN-U567296 Tomato 200607 Build 2 10 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T349722 [Download][View] Facility Assigned ID: TUS64P12_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 0.0087 Quality Trim Threshold: 14.5