EST details — SGN-E548895
| Search information |
| Request: 548895 | Match: SGN-E548895 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192360 | Clone name: TUS-65-G14 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C92279 [cLEX-10-L19] | Trace: SGN-T116816 | EST: SGN-E305042 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E548895 | Length: 706 bp (885 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E548895 [] (trimmed)
TCTCTCTCAAGACAAGAACTGTAGCGTACAACTTCCGTCAACCATGGCTGCCGAATCTGCTTTTGCAATTCCCAAAGGCCAAGTTGATTTGATGG
ACTTTGTAGACTGGTCTGGCGTCGAATGCCTTAACCAAAGTGGCAGCAACACTATTGTCAATGCCCTCAAACAGGGTTACAGAGAAGACGAGGGC
TTGAACCTGGTGAGTGATGCAGATGAACAGCTATTGATTTACATACCTTTTAATCAAGTCATCAAACTGCATTCAATCGTTATCAAAGGACCTGA
GGAGGAAGGTCCTAAAACTGTGAAGCTGTTTTCTAACAAGGAGCACATGGGATTTAGTAATGTTAATGATTACCCTCCAAGTGACACAGTTGTTT
TATCTGAAGATAACCTCAAGGGAAAACCAGTTACCTTGAAGTATGTCAAGTTTCAAAATGTTCGCAGTGTGACCATTTTTATTGAGGATAATCAA
CATGATGGGGAAACTACAAATGTTCAAAAAATTGTTTTGTATGGATCAACGGTGGAAACAACAGATATGAAAGGCTTGAAGAAGATTGAGGACCA
CTGATCCTGCAAAAGATCATTATAATTGTTCATCATTTTAAGAATTTTGTTTTCTTTTTAACTTCTGTAGTTTACGACAGAAGTAATTGGAAACT
TGATACACTGGATATACCAAATTACAGTGTGAGCTGTCGCT
ACTTTGTAGACTGGTCTGGCGTCGAATGCCTTAACCAAAGTGGCAGCAACACTATTGTCAATGCCCTCAAACAGGGTTACAGAGAAGACGAGGGC
TTGAACCTGGTGAGTGATGCAGATGAACAGCTATTGATTTACATACCTTTTAATCAAGTCATCAAACTGCATTCAATCGTTATCAAAGGACCTGA
GGAGGAAGGTCCTAAAACTGTGAAGCTGTTTTCTAACAAGGAGCACATGGGATTTAGTAATGTTAATGATTACCCTCCAAGTGACACAGTTGTTT
TATCTGAAGATAACCTCAAGGGAAAACCAGTTACCTTGAAGTATGTCAAGTTTCAAAATGTTCGCAGTGTGACCATTTTTATTGAGGATAATCAA
CATGATGGGGAAACTACAAATGTTCAAAAAATTGTTTTGTATGGATCAACGGTGGAAACAACAGATATGAAAGGCTTGAAGAAGATTGAGGACCA
CTGATCCTGCAAAAGATCATTATAATTGTTCATCATTTTAAGAATTTTGTTTTCTTTTTAACTTCTGTAGTTTACGACAGAAGTAATTGGAAACT
TGATACACTGGATATACCAAATTACAGTGTGAGCTGTCGCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E548895] | SGN-U563312 | Tomato 200607 | Build 2 | 31 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T349770 [Download][View] | Facility Assigned ID: TUS65G14_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.977 | Expected Error Rate: 0.0067 | Quality Trim Threshold: 14.5 |
Working
