EST details — SGN-E548910
| Search information |
| Request: 548910 | Match: SGN-E548910 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192414 | Clone name: TUS-65-I20 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C92567 [cLEX-11-L6] | Trace: SGN-T117116 | EST: SGN-E304760 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C192414 [TUS-65-I20] | Trace: SGN-T344508 | EST: SGN-E543633 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E548910 | Length: 831 bp (922 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E548910 [] (trimmed)
CGTTGTACGAAAATCTTTTTTTATTCAAAATTTTAAATTACGTTGTATTTGTCCCCAAGTACGTACTTAGACCTTTTCTTTTTTTCTTCTTCTTC
ATATTCATACTTTTGAATTATCAACTAGCAAAAGCACGGAAAAGTTGGATTACATCATCCATTCACATTATCAATTTTTTTGTAACTTGTTAATT
GGCCCATTTGGAGTAGTTTGCTATTCATCCGGCAAGGCTGTCAAAGTTATTGGACACCCACTTCTTAATCTGGGAATATGGGCTTTTCTTTCCAA
GCTGCGATCTGGATCGTCAACTGTCCATTTGTATCCAGTTGTTAATCTGTGCAAAAACACCAACATGGTGACTTTTGCCATGTTAATTCCCAAGC
AAGTTCGGGGTCCTGATCCAAAAGGAATGTAGCTATATGGTTTTTGAATTTCCTGAATATGAGAAAAATAGGCATGGTTAAATAGTACTATGTGT
TCATAACATTTATAAGTTAAACGTAATTAGTACGTCGAATCTTGAAGGATTGAACTGCATAGGGTCTTTGTATAATGTTGGATCGTAGTGTATGC
ACGTTGCATCTATGTTCGCATGCCATCCTTTCTTTATTTCAAAACCTTCAATACTACAGTCATTAAGTGCAACTCGAGGGAACCATAGCAAGACA
TTCGACATCCTCAACGTCTCTTTCACAACCTTTGACGCATAGGACATGCTGTTGAGATCATCCATGGTTAGTAAGGCTCCAGTAGGCTTGCTTCT
GAGGTATGAGAGTTGTTCTTCTCTGAGCCCTGTCTGGGCTTCTCTGTGCTCATCCCAAAAACTGACACTCC
ATATTCATACTTTTGAATTATCAACTAGCAAAAGCACGGAAAAGTTGGATTACATCATCCATTCACATTATCAATTTTTTTGTAACTTGTTAATT
GGCCCATTTGGAGTAGTTTGCTATTCATCCGGCAAGGCTGTCAAAGTTATTGGACACCCACTTCTTAATCTGGGAATATGGGCTTTTCTTTCCAA
GCTGCGATCTGGATCGTCAACTGTCCATTTGTATCCAGTTGTTAATCTGTGCAAAAACACCAACATGGTGACTTTTGCCATGTTAATTCCCAAGC
AAGTTCGGGGTCCTGATCCAAAAGGAATGTAGCTATATGGTTTTTGAATTTCCTGAATATGAGAAAAATAGGCATGGTTAAATAGTACTATGTGT
TCATAACATTTATAAGTTAAACGTAATTAGTACGTCGAATCTTGAAGGATTGAACTGCATAGGGTCTTTGTATAATGTTGGATCGTAGTGTATGC
ACGTTGCATCTATGTTCGCATGCCATCCTTTCTTTATTTCAAAACCTTCAATACTACAGTCATTAAGTGCAACTCGAGGGAACCATAGCAAGACA
TTCGACATCCTCAACGTCTCTTTCACAACCTTTGACGCATAGGACATGCTGTTGAGATCATCCATGGTTAGTAAGGCTCCAGTAGGCTTGCTTCT
GAGGTATGAGAGTTGTTCTTCTCTGAGCCCTGTCTGGGCTTCTCTGTGCTCATCCCAAAAACTGACACTCC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E548910] | SGN-U582298 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T349785 [Download][View] | Facility Assigned ID: TUS65I20_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.959 | Expected Error Rate: 0.0058 | Quality Trim Threshold: 14.5 |
Working
