EST details — SGN-E548914

Search information 
Request: 548914Match: SGN-E548914
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C192428Clone name: TUS-65-J10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C92621 [cLEX-11-O5] Trace: SGN-T117034 EST: SGN-E304678 Direction: 5' Facility: TIGR
Clone: SGN-C192428 [TUS-65-J10] Trace: SGN-T344532 EST: SGN-E543657 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E548914Length: 861 bp (909 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E548914 [] (trimmed) GACAAGAAAACTTATTAATTGGATGGATAACAACAACTTAAGCTTTTTTCATACATATTAGTGGGGAATCTGAATTTACTTATGACATTAGGAAA
GAAACAGTGCCATTAAGCCAAAAATACAGAACATAGGACAGGCAAGAATAACAAAACCCAATAGATTAAAATGCAAGCAGCATTTAACTACAGAG
ATTTGGTATGCAAGCTCCTTCGTCTGGATTCTGTTGTTCCTTCCATATTCTTCCAGTGACTCTTAGCTTGAGCTCCTTTCTGTCTCCTCCGGAGA
AGAAAAGGGCCATGTTACGTTGGATAACGAGACCATCATGGCTATCCCTAACTTTCCTATGACTGTCTCTTATGCTTCGGGGTGTACCCTCCCAG
ATAAGCTTCCTTCCGTTTCCCCCTACTTCCAGGCTGTAGGTGTAGTTTTGTGCATCTGTCTCGTCTCCCATAAAACGGAGGAACGCCATGTAAAC
GGGAGCCATTCCAAGCTGAAATGCTTCGAAATGGAGACAAAAGTACTGACCAAAACAATTGAAAACTGTTAACATCCACGTAGCATTTTCCACTT
CTCGGGGATTAGATTTGACATAGCGATGGTTAAAAGTGCATCCAGAGTGCATGTCTACCTTGTGATCATCCCTCAGATGAGTAACCAAATAAGGA
ATATCCCCAACAGCTGCACACTCTGACCCAGCATACGGGCAGTTGTATGGTCTAAAATTACAGGCAGCCTCATGTTTCAGCTTACTGTAATAAGG
AAATATTTCAGGACATCCAAGAGAGCCAAATTTACAAGGTAGCTCAAGTGATTCAGCCACCTTTTTCAATGCTAGACATCTGATATCACCAAGCT
CCTGTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E548914] SGN-U570955 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T349789 [Download][View] Facility Assigned ID: TUS65J10_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.980 Expected Error Rate: 0.0084 Quality Trim Threshold: 14.5