EST details — SGN-E548956
Search information |
Request: 548956 | Match: SGN-E548956 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C192577 | Clone name: TUS-65-P15 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C93560 [cLEX-15-A3] | Trace: SGN-T117854 | EST: SGN-E305368 | Direction: 5' | Facility: TIGR |
Clone: SGN-C192577 [TUS-65-P15] | Trace: SGN-T344788 | EST: SGN-E543913 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E548956 | Length: 745 bp (862 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E548956 [] (trimmed)
AATCCCCAAAACTCAAAGAGTATTTTTTATATTTAATGACAGTAACAATAATTAATAACAATTCCACAGTGCTACGTTCTTAAGATCGAGGTCCA
ATGCCAGGAAATGGAAGTCCCATTCCGAGTGGTTGCTCGGCGCCTTCTGGATGAGCGTACATCTTTGCATACAGTTTAGTGAATTCATCAAAATC
TATTGCGCCGCTATCGTCTTTATCCCACATTTGAAATTGCATATCCACATATCGGTTCACCATTGTAGAGCTCATTTTTTTCCCCACAGTCTGCA
ACAGCAAACTACGCAACTCTCCTTTGTCAATGGTTCCGTTCTTATTTTTGTCGGTGTCTTCGAATTTTGTTCTAGCCTCTGCCAGTTGTTCTGGG
TTTAGTGAAAATTCCTGTCGGTCCACTTTTGGTGCATTCTCTCCTGTTTCCAAAACCACCTTTTTCTCTACTTGTCTGTATCCATGTACAGGGAG
CTCTGGATCCAAATAAATCTTGCTGTAGAGTGAAACAAATTCATTAAAGTCAATACTACCATTGTAGTCTGCATCTGTAGCATTGAATTGTATTT
CAAAGTATTTGGCAAATAGATTGTCCGAGATTTTTCGGTTCAAGGTATCTTCTAATAAGGCACGAAACTCTTGCTTGTCAAGTGTTCCGCTATTG
TCTGTGTCGTATTTGGCGAAATTTCGACGGCACTGCTCTCTCTGGGCTGGAGTTAGCTGTTGTTCTTTCAAGTTAGCCTG
ATGCCAGGAAATGGAAGTCCCATTCCGAGTGGTTGCTCGGCGCCTTCTGGATGAGCGTACATCTTTGCATACAGTTTAGTGAATTCATCAAAATC
TATTGCGCCGCTATCGTCTTTATCCCACATTTGAAATTGCATATCCACATATCGGTTCACCATTGTAGAGCTCATTTTTTTCCCCACAGTCTGCA
ACAGCAAACTACGCAACTCTCCTTTGTCAATGGTTCCGTTCTTATTTTTGTCGGTGTCTTCGAATTTTGTTCTAGCCTCTGCCAGTTGTTCTGGG
TTTAGTGAAAATTCCTGTCGGTCCACTTTTGGTGCATTCTCTCCTGTTTCCAAAACCACCTTTTTCTCTACTTGTCTGTATCCATGTACAGGGAG
CTCTGGATCCAAATAAATCTTGCTGTAGAGTGAAACAAATTCATTAAAGTCAATACTACCATTGTAGTCTGCATCTGTAGCATTGAATTGTATTT
CAAAGTATTTGGCAAATAGATTGTCCGAGATTTTTCGGTTCAAGGTATCTTCTAATAAGGCACGAAACTCTTGCTTGTCAAGTGTTCCGCTATTG
TCTGTGTCGTATTTGGCGAAATTTCGACGGCACTGCTCTCTCTGGGCTGGAGTTAGCTGTTGTTCTTTCAAGTTAGCCTG
Unigenes |
Current Unigene builds | |||||
[SGN-E548956] | SGN-U570709 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T349831 [Download][View] | Facility Assigned ID: TUS65P15_P1 |
Submitter: Koni | Sequencing Facility: INRA (MWG) |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.963 | Expected Error Rate: 0.0061 | Quality Trim Threshold: 12.5 |