EST details — SGN-E548956

Search information 
Request: 548956Match: SGN-E548956
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C192577Clone name: TUS-65-P15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C93560 [cLEX-15-A3] Trace: SGN-T117854 EST: SGN-E305368 Direction: 5' Facility: TIGR
Clone: SGN-C192577 [TUS-65-P15] Trace: SGN-T344788 EST: SGN-E543913 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E548956Length: 745 bp (862 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E548956 [] (trimmed) AATCCCCAAAACTCAAAGAGTATTTTTTATATTTAATGACAGTAACAATAATTAATAACAATTCCACAGTGCTACGTTCTTAAGATCGAGGTCCA
ATGCCAGGAAATGGAAGTCCCATTCCGAGTGGTTGCTCGGCGCCTTCTGGATGAGCGTACATCTTTGCATACAGTTTAGTGAATTCATCAAAATC
TATTGCGCCGCTATCGTCTTTATCCCACATTTGAAATTGCATATCCACATATCGGTTCACCATTGTAGAGCTCATTTTTTTCCCCACAGTCTGCA
ACAGCAAACTACGCAACTCTCCTTTGTCAATGGTTCCGTTCTTATTTTTGTCGGTGTCTTCGAATTTTGTTCTAGCCTCTGCCAGTTGTTCTGGG
TTTAGTGAAAATTCCTGTCGGTCCACTTTTGGTGCATTCTCTCCTGTTTCCAAAACCACCTTTTTCTCTACTTGTCTGTATCCATGTACAGGGAG
CTCTGGATCCAAATAAATCTTGCTGTAGAGTGAAACAAATTCATTAAAGTCAATACTACCATTGTAGTCTGCATCTGTAGCATTGAATTGTATTT
CAAAGTATTTGGCAAATAGATTGTCCGAGATTTTTCGGTTCAAGGTATCTTCTAATAAGGCACGAAACTCTTGCTTGTCAAGTGTTCCGCTATTG
TCTGTGTCGTATTTGGCGAAATTTCGACGGCACTGCTCTCTCTGGGCTGGAGTTAGCTGTTGTTCTTTCAAGTTAGCCTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E548956] SGN-U570709 Tomato 200607 Build 2 3 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T349831 [Download][View] Facility Assigned ID: TUS65P15_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0061 Quality Trim Threshold: 12.5