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EST details — SGN-E548958

Search information 
Request: 548958Match: SGN-E548958
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C192584Clone name: TUS-65-P22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C93591 [cLEX-15-C18] Trace: SGN-T117905 EST: SGN-E305419 Direction: 5' Facility: TIGR
Clone: SGN-C192584 [TUS-65-P22] Trace: SGN-T344800 EST: SGN-E543925 Direction: 5' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E548958Length: 689 bp (920 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E548958 [] (trimmed) GAATAGAGTTACGCGATAGTTCTACTAATGGGAGGTAGCAGGTACCCCGTAGAGTTACTCGAGATGTAAGCTAGCTCGGGCACCACAGTAATAAT
TAAAAAAGGATAGTGTCAACAAGTACATTAACTACTTGGCAAGGAGTAACTTTACCCTCTTGCTAAGATCCCTCATAACATCTACAATGAGGGAC
TTCTTTTGTATTCTGAACTGGAGAGCCAACTCAGTAGTAGGTGAAACATTTTGCTTCAGCAACGACTTGTCCTCCATGATTTTCGTTGGGAAGTG
TCCGAGAGCAATAACACACAAAGCCACAACGGTGCGAAGAGCTGATACTTCAGTTGATATTCCCAGAGGGGCTTCGACTGTCAATGATTTGAGCG
TCTCTAAGTCGTGCTGCTTCACTGCTTCTTCATCGTTTGACAGGACAACTCTCAAGGCTGCTAATAATCGGCCCTCTACTAGCTCTCCACCTCCT
AGTGTCACCTTCAGATCAGAGTTTGGTCCGTCTAGATTTAAATGCGATAAAATCTGCTGCTGCCATGGGGATGGCGAGGAGAAGTTTGGGGATGT
AAACCCTGCAGCCATACTGGCAGCATCAAGAAGAGCAGCATCATATTTAAGTTCGATGCAGTCGTAGGGGTTTGATGGAATGACGAATCCATAGT
CCAGAAGAGAAAGATCACTACTTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E548958] SGN-U563397 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T349833 [Download][View] Facility Assigned ID: TUS65P22_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.982 Expected Error Rate: 0.0043 Quality Trim Threshold: 14.5