EST details — SGN-E549030
| Search information |
| Request: 549030 | Match: SGN-E549030 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192839 | Clone name: TUS-66-K13 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C95915 [cLEY-13-M9] | Trace: SGN-T119249 | EST: SGN-E306071 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C192839 [TUS-66-K13] | Trace: SGN-T345238 | EST: SGN-E544363 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E549030 | Length: 842 bp (885 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E549030 [] (trimmed)
GCTTAAATGCTTTTTTACTAATCAAATACTTACATATTAAAGTTGGAGGATAGATTATCAATTACTACAATTTATTTACCATTCACGAAACTTTG
CTTCAAATTAAAACAAAATGATTAACACAAACGGTAGCACACAAAATATGCTTCTCAATCAAACCTTTTGATCATTGGGAGACCCGACCCGACAT
TCCATCACCTCCGGATCCCTGCATTTCTTCGCTAACTGGACCTCCGTAACCCGGAACAACTCCTGAATTCCTAACTGCATAGTAATTCATTCCTT
CAGTAACAACTCTTAATTCATTCGGGTCAACACTCATTACCGGCCTCAATCCACTATATACTTGGCCCATACTTGAAGCGGGTGGATACCCGACG
GGTAATTGATTCGGAGGAACTGGAAAAGGATGAATATATGGAGCCCTTAATGTAATGGGTTGAACCGGGATATTTCCTGGCTGAACCGAACCAGG
GACATAGTAAACGGGTATGGTTTGCACCGGTGGTGCTGGGTAATGCCATAGTGGACTACTTGGATAACTCTGTTGTTGCTGTTGAACCGTCCTTT
CACCGGTTTCAGTCGCACTCGCAACCGGTGTTTCTCTGGATTCAGCTGTCGGATTTGGTTTATCGAGCTTTGTTTTAACCGGTGGAAGATCCGGC
ATCACTGTCATAGCTGCTGTAGGTGTCATTGATGATGATGAAATAGAGCAATAAGGAGAAGAAACAATGGGGTGGAGCGGGTGAGCCCGGCTCCG
AAATTATCTTGTTCTTCACGAATTTCGATTCGCGGGGGCGGGTCATCGGAATTGTCCAGCCCCGAACAGTAATCCGGAACTT
CTTCAAATTAAAACAAAATGATTAACACAAACGGTAGCACACAAAATATGCTTCTCAATCAAACCTTTTGATCATTGGGAGACCCGACCCGACAT
TCCATCACCTCCGGATCCCTGCATTTCTTCGCTAACTGGACCTCCGTAACCCGGAACAACTCCTGAATTCCTAACTGCATAGTAATTCATTCCTT
CAGTAACAACTCTTAATTCATTCGGGTCAACACTCATTACCGGCCTCAATCCACTATATACTTGGCCCATACTTGAAGCGGGTGGATACCCGACG
GGTAATTGATTCGGAGGAACTGGAAAAGGATGAATATATGGAGCCCTTAATGTAATGGGTTGAACCGGGATATTTCCTGGCTGAACCGAACCAGG
GACATAGTAAACGGGTATGGTTTGCACCGGTGGTGCTGGGTAATGCCATAGTGGACTACTTGGATAACTCTGTTGTTGCTGTTGAACCGTCCTTT
CACCGGTTTCAGTCGCACTCGCAACCGGTGTTTCTCTGGATTCAGCTGTCGGATTTGGTTTATCGAGCTTTGTTTTAACCGGTGGAAGATCCGGC
ATCACTGTCATAGCTGCTGTAGGTGTCATTGATGATGATGAAATAGAGCAATAAGGAGAAGAAACAATGGGGTGGAGCGGGTGAGCCCGGCTCCG
AAATTATCTTGTTCTTCACGAATTTCGATTCGCGGGGGCGGGTCATCGGAATTGTCCAGCCCCGAACAGTAATCCGGAACTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E549030] | SGN-U585430 | Tomato 200607 | Build 2 | 19 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T349905 [Download][View] | Facility Assigned ID: TUS66K13_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.981 | Expected Error Rate: 0.0042 | Quality Trim Threshold: 14.5 |
Working
