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EST details — SGN-E549179

Search information 
Request: 549179Match: SGN-E549179
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C193366Clone name: TUS-68-A12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C100644 [cLEZ-9-E1] Trace: SGN-T122205 EST: SGN-E311600 Direction: 5' Facility: TIGR
Clone: SGN-C193366 [TUS-68-A12] Trace: SGN-T346143 EST: SGN-E545268 Direction: 3' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E549179Length: 675 bp (887 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E549179 [] (trimmed) GTGCTCATGGAATCGGACCTGATTCGACCTCGTATTGCTATACATGCTTTCTTCACTGCATGCTGCCGGGGATATGTAAATGTGGTGGACACTCT
CTTTAAGCTTGGAGTGACTGTGAATGCTACAAATCGTGTGTTGCTCCAGTCAAGTAAACCTTCTCTGCATACAAATGTGGACTGCACAGCACTTG
TGGCTGCGATTGTTTGTAGGCAAGTCTCTGTAGTTCGTCTGTTGCTTGAGGCTGGTGCAAAAACTGATGGACCAGTCCAACTTGGAGCCTGGTCC
TGGGATGCAGCTTCACGTGAAGAATTTCGAGTAGGTGCTGGGTTAGCAGATTCCTATGCCATTACTTGGTGTGCTGCGGAGTATTTTGAAGCTAG
TGGCGCTATTTTGCAAATGCTCCTCCAGCGGCTTGATTCCTGCACTACTCTCAGTGGAAGAACTCTTCTCCACCATGCTATTCTTTGTGGTAATG
CATGAGCAGTTTCGGTGCTTTTGAAATGCGGTGCTTATGTGGAATCTCCAGTTATAACCACCCGGAACATTGAGTTTCGTCCTATACACATGGCA
GCCCGACTTGGGTTCTCAAGCGTTCTTAGATGATTGATTGAATTTGGCTGTGATCTGGATGCAAGAACGGACACAGGAGATACAGCTTTAATGAT
CTCTGCAAGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E549179] SGN-U568169 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T350054 [Download][View] Facility Assigned ID: TUS68A12_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.978 Expected Error Rate: 0.0086 Quality Trim Threshold: 14.5