EST details — SGN-E549204
| Search information |
| Request: 549204 | Match: SGN-E549204 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C193455 | Clone name: TUS-68-E5 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C98818 [cLEZ-13-I1] | Trace: SGN-T122741 | EST: SGN-E308678 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C193455 [TUS-68-E5] | Trace: SGN-T346296 | EST: SGN-E545421 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E549204 | Length: 540 bp (896 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E549204 [] (trimmed)
AAAGTGAATAAAAACAACATTCTATTTATTGAATTGACATGTCCAAAAAGGTAAAGATACATGAACATGACAGAACTAGTAAGTAAGTAAAGTGA
AGTGATGAAGCTGCATTTATATATATGCAAAGCTTACTTATTCTGAACAAGAGGTCCATGGAGCAGATAATAATTTTTCAATCAACAAGTGTAAC
CAGTAGGATAATTCTTTCCACAGACGTTGAGAAGGATGTTTAGAGAGATTGGTATATCCAAATGAATACCCAGAATATCTGCTTTTATGGCTGTG
CACAAGCAAACCGCGGCCTCTAGGTCCACCAGTCCCCCAATCAAACTGCAGCATGACGAAGTTGGAGTAGTCCCGATAATTACACCCACCAAATC
ATTAAGTATATTAGTACATGCCCCAAATTTCAAAATATCAGTTGAACAGTCTGCACTTACAAGAGCAAAGAAGAGGAGATTAAGTGATAAGAAAA
GGGTAATAGAGGCCTGATTTTTGGAAGCCATGTCAACAAGATAAGGTTAGGCCTAATTAATCACC
AGTGATGAAGCTGCATTTATATATATGCAAAGCTTACTTATTCTGAACAAGAGGTCCATGGAGCAGATAATAATTTTTCAATCAACAAGTGTAAC
CAGTAGGATAATTCTTTCCACAGACGTTGAGAAGGATGTTTAGAGAGATTGGTATATCCAAATGAATACCCAGAATATCTGCTTTTATGGCTGTG
CACAAGCAAACCGCGGCCTCTAGGTCCACCAGTCCCCCAATCAAACTGCAGCATGACGAAGTTGGAGTAGTCCCGATAATTACACCCACCAAATC
ATTAAGTATATTAGTACATGCCCCAAATTTCAAAATATCAGTTGAACAGTCTGCACTTACAAGAGCAAAGAAGAGGAGATTAAGTGATAAGAAAA
GGGTAATAGAGGCCTGATTTTTGGAAGCCATGTCAACAAGATAAGGTTAGGCCTAATTAATCACC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E549204] | SGN-U582798 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T350079 [Download][View] | Facility Assigned ID: TUS68E05_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.948 | Expected Error Rate: 0.0027 | Quality Trim Threshold: 12.5 |
Working
