EST details — SGN-E549241

Search information 
Request: 549241Match: SGN-E549241
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C193586Clone name: TUS-68-J16
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C99723 [cLEZ-18-P16] Trace: SGN-T123716 EST: SGN-E311501 Direction: 5' Facility: TIGR
Clone: SGN-C193586 [TUS-68-J16] Trace: SGN-T346521 EST: SGN-E545646 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E549241Length: 748 bp (908 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E549241 [] (trimmed) GGCAACCACCTAACATTTGCTTCGTACAAAAAAAATTATGGCTGAAACTCAAGAAACAGTTTCCAAATCAGTACAAGAACTAGCAAATACCAATC
AAGTTCCAGAAAAGTATATTTATGCACAAGGATCAATCAATACCTATCCTCTTTTGTTCGATGTGCCACAAGTTGATCTTAGCCTTCTCACATCC
CCTAACAGACAACAACAGCTCAACAAACTTCAATCAGGTCTCAAGTCTTGTGGCTGTATCCAGGTCATAAATCATGGAATGGAAGATTCATTTCT
TGACAAAGTGCGTGAAATAAGCAAAAAGTTCTTTGCTCTTCCAACTGAAGAGAAGCTTAAATATGCAAGAACAGTTAATCAAATTGAAGGATACG
GAAATGATAAAGTTCTTACAGATAAGCAAAGGCTTGATTGGTCCGATAGACTGTGTCTAAATGTGTTCCCTGAAGATATAAGAGAACTCCGATTC
TGGCCACAAAAACCTGAATGTTTTAGGGAAGTTTTTGAAGAATATATGAAGAATATGAAGTTGTTGAGTGAGTCCCTCCTAAAGGCCATGGCAGC
GTCATTGAACGTGGAGGAGAATTGCTTTCTGGACCAGTGTGGAGAACGTGGGATGACTACTGCAAGATTCAACTTCTACCCTCCGTGTCCAAGAC
CTGATGTGGTACTCGGAGTCAAACAACATGCTGATGCATCGGCCATTACCATCCTGTTGCAAGACAAAGAAAGTGAAGGGCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E549241] SGN-U563057 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T350116 [Download][View] Facility Assigned ID: TUS68J16_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.962 Expected Error Rate: 0.0083 Quality Trim Threshold: 14.5