EST details — SGN-E549241
| Search information |
| Request: 549241 | Match: SGN-E549241 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C193586 | Clone name: TUS-68-J16 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C99723 [cLEZ-18-P16] | Trace: SGN-T123716 | EST: SGN-E311501 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C193586 [TUS-68-J16] | Trace: SGN-T346521 | EST: SGN-E545646 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E549241 | Length: 748 bp (908 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E549241 [] (trimmed)
GGCAACCACCTAACATTTGCTTCGTACAAAAAAAATTATGGCTGAAACTCAAGAAACAGTTTCCAAATCAGTACAAGAACTAGCAAATACCAATC
AAGTTCCAGAAAAGTATATTTATGCACAAGGATCAATCAATACCTATCCTCTTTTGTTCGATGTGCCACAAGTTGATCTTAGCCTTCTCACATCC
CCTAACAGACAACAACAGCTCAACAAACTTCAATCAGGTCTCAAGTCTTGTGGCTGTATCCAGGTCATAAATCATGGAATGGAAGATTCATTTCT
TGACAAAGTGCGTGAAATAAGCAAAAAGTTCTTTGCTCTTCCAACTGAAGAGAAGCTTAAATATGCAAGAACAGTTAATCAAATTGAAGGATACG
GAAATGATAAAGTTCTTACAGATAAGCAAAGGCTTGATTGGTCCGATAGACTGTGTCTAAATGTGTTCCCTGAAGATATAAGAGAACTCCGATTC
TGGCCACAAAAACCTGAATGTTTTAGGGAAGTTTTTGAAGAATATATGAAGAATATGAAGTTGTTGAGTGAGTCCCTCCTAAAGGCCATGGCAGC
GTCATTGAACGTGGAGGAGAATTGCTTTCTGGACCAGTGTGGAGAACGTGGGATGACTACTGCAAGATTCAACTTCTACCCTCCGTGTCCAAGAC
CTGATGTGGTACTCGGAGTCAAACAACATGCTGATGCATCGGCCATTACCATCCTGTTGCAAGACAAAGAAAGTGAAGGGCTT
AAGTTCCAGAAAAGTATATTTATGCACAAGGATCAATCAATACCTATCCTCTTTTGTTCGATGTGCCACAAGTTGATCTTAGCCTTCTCACATCC
CCTAACAGACAACAACAGCTCAACAAACTTCAATCAGGTCTCAAGTCTTGTGGCTGTATCCAGGTCATAAATCATGGAATGGAAGATTCATTTCT
TGACAAAGTGCGTGAAATAAGCAAAAAGTTCTTTGCTCTTCCAACTGAAGAGAAGCTTAAATATGCAAGAACAGTTAATCAAATTGAAGGATACG
GAAATGATAAAGTTCTTACAGATAAGCAAAGGCTTGATTGGTCCGATAGACTGTGTCTAAATGTGTTCCCTGAAGATATAAGAGAACTCCGATTC
TGGCCACAAAAACCTGAATGTTTTAGGGAAGTTTTTGAAGAATATATGAAGAATATGAAGTTGTTGAGTGAGTCCCTCCTAAAGGCCATGGCAGC
GTCATTGAACGTGGAGGAGAATTGCTTTCTGGACCAGTGTGGAGAACGTGGGATGACTACTGCAAGATTCAACTTCTACCCTCCGTGTCCAAGAC
CTGATGTGGTACTCGGAGTCAAACAACATGCTGATGCATCGGCCATTACCATCCTGTTGCAAGACAAAGAAAGTGAAGGGCTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E549241] | SGN-U563057 | Tomato 200607 | Build 2 | 11 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T350116 [Download][View] | Facility Assigned ID: TUS68J16_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.962 | Expected Error Rate: 0.0083 | Quality Trim Threshold: 14.5 |
Working
