EST details — SGN-E549283

Search information 
Request: 549283Match: SGN-E549283
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C193735Clone name: TUS-68-P21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C100871 [cLHT-11-C19] Trace: SGN-T171349 EST: SGN-E359147 Direction: 5' Facility: TIGR
Clone: SGN-C193735 [TUS-68-P21] Trace: SGN-T346777 EST: SGN-E545902 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E549283Length: 642 bp (912 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E549283 [] (trimmed) GAATTACCAAGGCAAAAATATCTTGGGCCTTCTAAACTTTCTCCTCTGTGCTGTGCTGACGCATTTTGTTGAAACTTGAATTCTTGCTTTGCTCT
ATTCTTCCTTCTTGTTTGTTGCTGAAATTTATCAGCTGAGTTCTTCTTTCTTGAGAGAATTGGGGAATTATCAATTCTTGGAAAATTAGAGAAAG
CTGGAGTCTTGCTGCTAATTTACCTACAGCATATACTAGGCGATGTTTTCACCTTCAATTTGCTTTCCAACAACAATTCTTCAAATTCAGCCAGA
TAACACAAGTCGCTTCAGAACCCACAAATGTAAAAGCTATACTGATGACAGAAAACTTCCCTGTTTCTCTTTCAAAGACCCATCTTCCTCAGCTC
GTTTTGATGTTTCTGCAAGTTTTTGTAGAGACAATGAATTAGTTTGTCAATTGGAAGTTCCAGGTGATAAAATTTGTTCAGTGAATAGTTTTGTG
GCTGATTCAAGTTTGCTTGGTCGTTTGCTTCAATCTAGTTCTAGTTTAAAAGAAGTTAAAATACTTCATGCGATTGTATTAAAGTGTTTGAGGAG
CAGTACTATATTTGTTGAGAATAATTTGATTAGTGTGTTGGNTGAAATTTGGGGCGTTTGGATGACGCTCGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E549283] SGN-U572642 Tomato 200607 Build 2 3 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T350158 [Download][View] Facility Assigned ID: TUS68P21_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.953 Expected Error Rate: 0.0065 Quality Trim Threshold: 14.5