EST details — SGN-E549313
| Search information |
| Request: 549313 | Match: SGN-E549313 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C193841 | Clone name: TUS-69-E7 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C101327 [cLHT-17-N11] | Trace: SGN-T170828 | EST: SGN-E357163 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C193841 [TUS-69-E7] | Trace: SGN-T346959 | EST: SGN-E546084 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E549313 | Length: 799 bp (893 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E549313 [] (trimmed)
GTAAAAACAAGAAGGTGGAGATACTGGAGGCGTGAACTCTAATCTGTATCCTACGGGGCTAAAAAATGGCAGGTGAACCAGTTGATGTGAATGAA
TTTGAAGAGCTAGCTAGGCAAGTTCTTCCAAAGATATCCTATGACTTCTTTTCTGGAGGAGCTGAGGACCAGCACACACTCAAAGAAAATATTGA
AGCATTTCATAGAATCATAATCCAGCCAAGAATACTTGTTGATGTGAGCAGAATAGACATGTCAACTGTTATACTCAGTCACAAGACGTCAGCTC
CTATAATGATTGCCCCAACTATGATGCACAAATTTGCACACCCTGAAGGTTGTACTAAATCAATTACTCCATTCATTTCAATTTGTTTGTGTGGT
TTTGACTTGACACAACATTTAAGAAAGTAAAGAAGATTTTTGTGTCTTATTATCTTAAACTAAAGATATGTAGAATGTACCAAAAGATGTTTAAC
CTTGTGCTTTTAAACATGTCACGTGCAAAGATAGACTTAAAGACTTCTCAAATAAGAAAAGAGGAACCGACTAAAAAGGAAAGTAAGAGAAACAA
ATTGGAACGGAGAATATCTCCTTGGTCACTTATGGTTAACTGATTCTACAAACCTGTTATATTTATGCCAGGAGAAATTGCAACAGCTAGAGGTG
CTGCATCGTGTAATGTTATCGCGGTAATATTTTCTGGAAAAAAAAGACAGATTTTATCGAATTCTGGTGTCTGGATGCTAAATTCTCTTGGATAC
CGGGATTGTCATTTACGTTTAAGGCTGTTCGCTTCATTC
TTTGAAGAGCTAGCTAGGCAAGTTCTTCCAAAGATATCCTATGACTTCTTTTCTGGAGGAGCTGAGGACCAGCACACACTCAAAGAAAATATTGA
AGCATTTCATAGAATCATAATCCAGCCAAGAATACTTGTTGATGTGAGCAGAATAGACATGTCAACTGTTATACTCAGTCACAAGACGTCAGCTC
CTATAATGATTGCCCCAACTATGATGCACAAATTTGCACACCCTGAAGGTTGTACTAAATCAATTACTCCATTCATTTCAATTTGTTTGTGTGGT
TTTGACTTGACACAACATTTAAGAAAGTAAAGAAGATTTTTGTGTCTTATTATCTTAAACTAAAGATATGTAGAATGTACCAAAAGATGTTTAAC
CTTGTGCTTTTAAACATGTCACGTGCAAAGATAGACTTAAAGACTTCTCAAATAAGAAAAGAGGAACCGACTAAAAAGGAAAGTAAGAGAAACAA
ATTGGAACGGAGAATATCTCCTTGGTCACTTATGGTTAACTGATTCTACAAACCTGTTATATTTATGCCAGGAGAAATTGCAACAGCTAGAGGTG
CTGCATCGTGTAATGTTATCGCGGTAATATTTTCTGGAAAAAAAAGACAGATTTTATCGAATTCTGGTGTCTGGATGCTAAATTCTCTTGGATAC
CGGGATTGTCATTTACGTTTAAGGCTGTTCGCTTCATTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E549313] | SGN-U573112 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T350188 [Download][View] | Facility Assigned ID: TUS69E07_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.959 | Expected Error Rate: 0.0038 | Quality Trim Threshold: 14.5 |
Working
