EST details — SGN-E549402
| Search information |
| Request: 549402 | Match: SGN-E549402 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194157 | Clone name: TUS-70-B11 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C102889 [cLHT-32-A11] | Trace: SGN-T171926 | EST: SGN-E357956 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194157 [TUS-70-B11] | Trace: SGN-T347502 | EST: SGN-E546627 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E549402 | Length: 522 bp (976 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E549402 [] (trimmed)
CTATAAAACATTCTCATGGCCCCTTCTTTACCATTAAACATCAGTCGAACAGTTTTGATAGGAGGTTCACAAGTTAATATACATATAGTTAATAT
ACATATATATATATATATATTTAATTTTCTAATATAAATACATGATCTACGGAAAAACTATGGATTCATAGACTCCACTTTATTAAGTTTTTGCT
ACTTCCATGCCAATTGAAATAGTGCTTCATGTCCAATTTGATCCCATATATATAGTACTATAGTGAAATCGGGACAAGTCGTAGAGGACGTAATT
TGCCTACAATAAGACCACTTTTCTCCTCCGCATCCAAATCATCGTTGCCTTCAACAACCCACTCAAATGAATTCAACAACGAACCCAACATTATG
GGAACCGTCCTCATAGCCAAAGATATTGCAGGACACATTCTTCGACCAACACCAAAAGGGAATAAGCTTAAAATCATCTTGACCACGAATATCCA
TAACATTAGAACTCCAAAATCTTTTCAGGGGTAAATACCAAAGGATC
ACATATATATATATATATATTTAATTTTCTAATATAAATACATGATCTACGGAAAAACTATGGATTCATAGACTCCACTTTATTAAGTTTTTGCT
ACTTCCATGCCAATTGAAATAGTGCTTCATGTCCAATTTGATCCCATATATATAGTACTATAGTGAAATCGGGACAAGTCGTAGAGGACGTAATT
TGCCTACAATAAGACCACTTTTCTCCTCCGCATCCAAATCATCGTTGCCTTCAACAACCCACTCAAATGAATTCAACAACGAACCCAACATTATG
GGAACCGTCCTCATAGCCAAAGATATTGCAGGACACATTCTTCGACCAACACCAAAAGGGAATAAGCTTAAAATCATCTTGACCACGAATATCCA
TAACATTAGAACTCCAAAATCTTTTCAGGGGTAAATACCAAAGGATC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E549402] | SGN-U566284 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T350277 [Download][View] | Facility Assigned ID: TUS70B11_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.943 | Expected Error Rate: 0.0030 | Quality Trim Threshold: 20.5 |
Working
