EST details — SGN-E549420

Search information 
Request: 549420Match: SGN-E549420
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C194220Clone name: TUS-70-E2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C105913 [cLPP-1-E12] Trace: SGN-T174615 EST: SGN-E362554 Direction: 5' Facility: TIGR
Clone: SGN-C194220 [TUS-70-E2] Trace: SGN-T347610 EST: SGN-E546735 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E549420Length: 769 bp (839 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E549420 [] (trimmed) GAATTAGAACATAACTAATGCAAACTGGCTCTTATCCATCATATATATACACAGAAAACTAATTAGAAGCAAAAATGCAAGCCGCAAATTAACAA
GTAATTGTTGCTGAATGAAATCTAAAAAGAAGTAATAGCCAGATCATATACAGTAGCTTATATTAACTTGCATTGCAAATTTGCAAATACGGAAT
TTAAATAAGCTTTGAGTCATCGGCCATTCAAACAACATTATTTCTTGTGTATGTTGCCTTAAAAACCAAAGAAGTTCTTCTTTTTCTTCTTCTTC
TCAATGTAAGCTAAGAGCTCCTCTTGACGGGAAAGGGCTGTCTCAAGTGCCATTTTTGTTGCACAAAGTTCTTGCTCCAATTTATCAACATGAGT
CATGACATTGTTAAGCATTTCCTCTTTTTCGGGTGGTAAGGAACTAGGCGTGTTGCTAAGACTAATAACCTTCTCCTCTAGCTCTCCCATACGTT
TCATCATGCTGAAGTACTCATTATTTGAGATGGCAGGTCCACTCAACCGATATTCTTGACCGTGTACTGGTTTAACTTGCATATCAACTCCTTTT
AATGAACCTGACAAGAGAGTCGAATCTGTAAGCTTTCTTGGCATGTTGCGTGTCATTCGCACCATTGTCACCACACCCATCACAAATGTCATCAC
TCCTGTGAAAAGGTGGTTGCTAAATCCATCGGGGGATTTAGAAATATCATGCATGGGTAAGAAATCTGAAGCTTTAGCAATGGCGTAGTTGTCCG
CTTTTGTAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E549420] SGN-U570233 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T350295 [Download][View] Facility Assigned ID: TUS70E02_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.964 Expected Error Rate: 0.0054 Quality Trim Threshold: 14.5