EST details — SGN-E549470

Search information 
Request: 549470Match: SGN-E549470
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C194397Clone name: TUS-70-L11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C107729 [cLPP-6-J13] Trace: SGN-T175187 EST: SGN-E361415 Direction: 5' Facility: TIGR
Clone: SGN-C194397 [TUS-70-L11] Trace: SGN-T347914 EST: SGN-E547039 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E549470Length: 791 bp (917 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E549470 [] (trimmed) GATTAAAGTAACTAGTAAATTACAACACCATAGTACATCAAAAGAAAAATGAGAAAAAGAAATGGAAATATTTTCTCCAATGCATAAAATGGCAT
ATGAAGACAACCCGAATTTTCACTAGGTGGAAACAATTATCTAGTGACCGGTTGGCTATATGAATCATCATTTCTTTTTCTTCGAATCTTTTGGA
TTCTCTCACATCTATCTACTATTAATTAAAAAAAAAAAAAGCAAACCGTTTTTCTTCTTTTTTTTTAATTACAGAAAATAAGAGAAATTAAACCT
AAAAGTCAATGATAGGTTCACCAATTGTGAGATTTCTCTCCAATGACCATGGTAAATTGAAGAGTTTAGCAGTGATGAACTTGAATATCTTGTTC
ACATTAATGTTGTATGTTGCACTTGAGAAAAATAATGGTGCATTTAGTGCCTTTGCATATGCTCTTGCCTGACTTGCAATTGTCCATTGAAGATC
CAATGGCAATTTCACAAAATCATCAAACTTTGTCCCTATCATTACAGGAGTTGCTGTCTGATTCCATTGACGTGCTTGTTGATGCCAGCTAAGGA
CACTACTGAGTGTACATCTACTTGTGAGATCAAACATGAAAAACATTGCTACAGAATCCTTACAAGCCATTGGAATTTGAGTTGGGCCAGAAACA
TCACCTTTAACTTCCCACATGCTATATGAGATTCTTGTCCCTTTCACACATAAAGTTTTGTCCATTTGATTTACTCCTTTGGTTGACATCCTTCA
TCTACTTCCTCTTTTCCTACATATTTTCTCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E549470] SGN-U564362 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T350345 [Download][View] Facility Assigned ID: TUS70L11_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.942 Expected Error Rate: 0.0028 Quality Trim Threshold: 14.5