EST details — SGN-E549484
| Search information |
| Request: 549484 | Match: SGN-E549484 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194447 | Clone name: TUS-70-N13 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C108056 [cLPP-7-L18] | Trace: SGN-T173111 | EST: SGN-E360708 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194447 [TUS-70-N13] | Trace: SGN-T348000 | EST: SGN-E547125 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E549484 | Length: 752 bp (891 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E549484 [] (trimmed)
GTAACAACTCACTCAATAGACAAAATAACTTAATTTACAGTACAAGAGAACTCTGGAGAAACCAGCAGAAAAAACCAATAGCCTCGCAAATTTAT
CATACAAATCAGCACCACTACAAAAAAAAAAAGTTATAGTCATCATTAGCTCTTTGATTTCGAGTGCTTAACAAGCCAATCAATGACTGAGTCAA
TATTGGTGGAATTCTTGCACGAGATCATATAGCAGCACACTTCTCTATCAGTTATTGATTTCAATCCCATCTGGTCAGTCAAAGCCTGTTTGGAC
AGGGAATCAGGCTTGTCAATTTTGTTTCCCAGCACCAGCAATGGAATACCACTCAGAGATGGCTTGCTCAGCAGGTCATGGAGTTCACTACTTGA
TATGCTGAGGTTATCAGGATCAGCAGCATCAACAACATAAACTATAGCAGAAACAGCACGACAGTATCTCTCCCACATACTGCGGAATCTGGGTT
GACCTCCAAGGTCCCACAATTTTATAGTGACATTTCCTTTCGTCACTTTGCGCATGTTAAATCCCACAGTTGGTATCATGTCTTCACTGTATCCA
CCAGTTGCAATAACATTTACAAGAGATGTTTTTCCTGCATTTTGCAATCCTATCAATGAAAGCTCCATTTCCTGCTTAAAGAAGAGGCTTCGAAG
CCAATTGAGAAAAGCTTCCCAGATACCCATGGCTGATGCGAAGAATCGTAAAAGAGAGAGATCTGAATATCAGTATAAAGAAGAAAC
CATACAAATCAGCACCACTACAAAAAAAAAAAGTTATAGTCATCATTAGCTCTTTGATTTCGAGTGCTTAACAAGCCAATCAATGACTGAGTCAA
TATTGGTGGAATTCTTGCACGAGATCATATAGCAGCACACTTCTCTATCAGTTATTGATTTCAATCCCATCTGGTCAGTCAAAGCCTGTTTGGAC
AGGGAATCAGGCTTGTCAATTTTGTTTCCCAGCACCAGCAATGGAATACCACTCAGAGATGGCTTGCTCAGCAGGTCATGGAGTTCACTACTTGA
TATGCTGAGGTTATCAGGATCAGCAGCATCAACAACATAAACTATAGCAGAAACAGCACGACAGTATCTCTCCCACATACTGCGGAATCTGGGTT
GACCTCCAAGGTCCCACAATTTTATAGTGACATTTCCTTTCGTCACTTTGCGCATGTTAAATCCCACAGTTGGTATCATGTCTTCACTGTATCCA
CCAGTTGCAATAACATTTACAAGAGATGTTTTTCCTGCATTTTGCAATCCTATCAATGAAAGCTCCATTTCCTGCTTAAAGAAGAGGCTTCGAAG
CCAATTGAGAAAAGCTTCCCAGATACCCATGGCTGATGCGAAGAATCGTAAAAGAGAGAGATCTGAATATCAGTATAAAGAAGAAAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E549484] | SGN-U571254 | Tomato 200607 | Build 2 | 20 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T350359 [Download][View] | Facility Assigned ID: TUS70N13_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.963 | Expected Error Rate: 0.0085 | Quality Trim Threshold: 12.5 |
Working
