EST details — SGN-E549500
| Search information |
| Request: 549500 | Match: SGN-E549500 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194504 | Clone name: TUS-70-P22 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C108519 [cLPP-9-E22] | Trace: SGN-T172498 | EST: SGN-E359835 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194504 [TUS-70-P22] | Trace: SGN-T348098 | EST: SGN-E547223 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E549500 | Length: 621 bp (889 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E549500 [] (trimmed)
GGAAAACATAACAGTTGATAGATCCAATTGTATCTCCATTTTGTGAATTTGTTCACTTAAAGAACACCATATTGACCACAAATATGGATAAACTA
AAACAGCTAATATTAAAGCAAACTGCCCTCATCATGTCATGTAACCTGTATAAAGTCTAAGCTGCTCACATAGTTGAATAGCAACTTATCTAGAA
TGCAGATCAACACATCCAATGAAGTAACCAGTAAAGCATCTAACTAATTCTCCGACGGAAACACTTCTAAGTTCCCCCATTGCAGTAGTGTACAC
CATTACTAACTGTGTCATTGTGTTCCATTTTTACTTGATTCAAACCCCATATGCGAATTGTATGATCATCACTAGCAGAAGCCAACATATGAGGA
TCTGCTGGATTCCAGCTAACACAGTTTACTGTTCCAGAATGTCCCGCCAACGTCTCAACAAGTTCTCCTGAGCTTATGTGCCATATATAAACCTG
TGAGTCCTCACTTCCACTAGAAATAAATGCTTGATTCAGTCCGCCAAAGCAAGATCTTATGACGAAGCGTGAACGTTTATGCCCATTATATTTGG
ATATGAGTTTTGCAGTTCCCTCTATATCCCACAGATGAATTTCTTGATTCC
AAACAGCTAATATTAAAGCAAACTGCCCTCATCATGTCATGTAACCTGTATAAAGTCTAAGCTGCTCACATAGTTGAATAGCAACTTATCTAGAA
TGCAGATCAACACATCCAATGAAGTAACCAGTAAAGCATCTAACTAATTCTCCGACGGAAACACTTCTAAGTTCCCCCATTGCAGTAGTGTACAC
CATTACTAACTGTGTCATTGTGTTCCATTTTTACTTGATTCAAACCCCATATGCGAATTGTATGATCATCACTAGCAGAAGCCAACATATGAGGA
TCTGCTGGATTCCAGCTAACACAGTTTACTGTTCCAGAATGTCCCGCCAACGTCTCAACAAGTTCTCCTGAGCTTATGTGCCATATATAAACCTG
TGAGTCCTCACTTCCACTAGAAATAAATGCTTGATTCAGTCCGCCAAAGCAAGATCTTATGACGAAGCGTGAACGTTTATGCCCATTATATTTGG
ATATGAGTTTTGCAGTTCCCTCTATATCCCACAGATGAATTTCTTGATTCC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E549500] | SGN-U570622 | Tomato 200607 | Build 2 | 26 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T350375 [Download][View] | Facility Assigned ID: TUS70P22_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.947 | Expected Error Rate: 0.0038 | Quality Trim Threshold: 20.5 |
Working
