EST details — SGN-E549579
| Search information |
| Request: 549579 | Match: SGN-E549579 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194783 | Clone name: TUS-71-L13 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C105247 [cLPP-17-I17] | Trace: SGN-T176798 | EST: SGN-E365086 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E549579 | Length: 709 bp (872 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E549579 [] (trimmed)
GCTTCTCTTTCTCTCTCTCTCCCTCTCCTGCTCTTTCTTCTTCTTCTTTCTTCCCCTGGATCTTCAAACCCAACCCAATCTCTCCAAATCATAAA
AAATCGAAACAATCCTTTAATTTCTGTGTTTCTTTAACACATTTTTCTCAAAATCTTTCTTTTTAACTTTTTTTTTTTTGGACTGATCTGGTTTA
GAAACGGGTCTGATTTGATCACATCGTGGGAGATTGATAAAAGGGGAAGATCCTTTCGTCATATAAAGAAGTGGGTACTTTTTTATAAGCTGTCC
GTTAGAGGGCTGTTGAATAAAATAGGAAAGAGTTACCCAGTGGTGCAGCGGCTGGAAGAAGTTTAGTACAGGGTTGATAGAAAATCCTTATTCTA
TATTACCTAGTCCTTCTTCACCTTCATTATACAACTTTTATTATCTGAGATTCCTTTCTTCTCTTCTTAAACCAATTCCTAAGTGGAAGTGCTTT
GTCTTATATATGCTTGTATTGCCTTGCACGTTTCCTTGAGGGCCTTCTGCCTATTTGTGCTTTAAGTTTCTTGTTTTTGGTGTTTAGCTACAAAA
TAAGCAAATATGATGTTTTAGCTTGCCATTTTACACATAGAAGATGGCGTTTCGTTCTGAGGAAACACAAACGGAGGATTACCTTTTCAAGATTG
TTTTGATTGGTGATTCAGCTGTTGGGAAATCAAATTTGCTTGCT
AAATCGAAACAATCCTTTAATTTCTGTGTTTCTTTAACACATTTTTCTCAAAATCTTTCTTTTTAACTTTTTTTTTTTTGGACTGATCTGGTTTA
GAAACGGGTCTGATTTGATCACATCGTGGGAGATTGATAAAAGGGGAAGATCCTTTCGTCATATAAAGAAGTGGGTACTTTTTTATAAGCTGTCC
GTTAGAGGGCTGTTGAATAAAATAGGAAAGAGTTACCCAGTGGTGCAGCGGCTGGAAGAAGTTTAGTACAGGGTTGATAGAAAATCCTTATTCTA
TATTACCTAGTCCTTCTTCACCTTCATTATACAACTTTTATTATCTGAGATTCCTTTCTTCTCTTCTTAAACCAATTCCTAAGTGGAAGTGCTTT
GTCTTATATATGCTTGTATTGCCTTGCACGTTTCCTTGAGGGCCTTCTGCCTATTTGTGCTTTAAGTTTCTTGTTTTTGGTGTTTAGCTACAAAA
TAAGCAAATATGATGTTTTAGCTTGCCATTTTACACATAGAAGATGGCGTTTCGTTCTGAGGAAACACAAACGGAGGATTACCTTTTCAAGATTG
TTTTGATTGGTGATTCAGCTGTTGGGAAATCAAATTTGCTTGCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E549579] | SGN-U564984 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T350454 [Download][View] | Facility Assigned ID: TUS71L13_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.946 | Expected Error Rate: 0.0037 | Quality Trim Threshold: 14.5 |
Working
