EST details — SGN-E549584

Search information 
Request: 549584Match: SGN-E549584
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C194801Clone name: TUS-71-M7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C105437 [cLPP-18-C1] Trace: SGN-T177228 EST: SGN-E364587 Direction: 5' Facility: TIGR
Clone: SGN-C194801 [TUS-71-M7] Trace: SGN-T348608 EST: SGN-E547733 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E549584Length: 741 bp (905 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E549584 [] (trimmed) ATGAAATAATGGTTTTCCAAAAATTAATGTAGTAATTACTATGTAACATATACAATTNTGATGAGAATCCAATTGAATACACTATTTGTTATAGA
GTAGATAAATATGAAGAACTATGAATTATGATTGTCAAGTATACTAACAACCTCAGACTTTTGTTCGTCACTCAATTCTAAAGGAAATTGGATAA
GAAACTGAAGTACAAGGTTTCCTCTATTTGTACTTTCTTGTTTAGATTTAGGCATGCCTTGGCCTGGTATGACTTTCTCAAATCCTGGATAAATG
ATTTCATCATCAAATGACATAGTCATTGCTTCGTCTCCGCCCAAAAGAGGTACAGTAATTGTACACCCTGTTAGAGCTTGTACTAGAGGGACTTC
AACTCCAAGAAGTAAGTCATCTCCTTCTCTTTTGTATAATGGATGTGTTTTCTCATCAATTGAGAATATTATATCTCCTGTTCTCTCATCCCCTT
TACCTTCGAAAGTAATCTTCGTTCCTCTCTTCCATCCCGGCTTCACCATTATCGTCACGACTTCTTCCTCTTTAACAATTAGCCCTGTTGTTGCA
ACAACATCTCTTGTTATTATGACCTTCTTGACGCATCCATTGCACAATTCCTCGAGTGTACATTCCAATTTCTTCTCAATTGGTTGAGTTTTTCT
CCGAGAAGTAGATTGAGAAAAAATGATAGGCTTACTAGCAACTTTGGAAAGGTTATTTGGAGGTTGATCTGATACA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E549584] SGN-U577027 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T350459 [Download][View] Facility Assigned ID: TUS71M07_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.954 Expected Error Rate: 0.0045 Quality Trim Threshold: 14.5