EST details — SGN-E549591

Search information 
Request: 549591Match: SGN-E549591
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C194825Clone name: TUS-71-N7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C105618 [cLPP-18-N14] Trace: SGN-T177219 EST: SGN-E364578 Direction: 5' Facility: TIGR
Clone: SGN-C194825 [TUS-71-N7] Trace: SGN-T348649 EST: SGN-E547774 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E549591Length: 710 bp (861 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E549591 [] (trimmed) GTTCCTCTTCTTTTTTTCTGATTTCCTTATAAGGAATCAGACATACTCCATACCTAAATTCTCTCACATTATAATTAAGAAGAGGAACATAATTA
AGTTACTAAATTAGTTTTTCTTTGGAAGATAATTACATGTAATTATGGATTTGATCTCCAAATCTCAAGAGTACAAGATCTAATTGCAAGGCTAT
ATATATATATATTTAAAGTCAAGAGATGGGTGCATGTTGTACATGTCAAAGGGGACACAAATTAGAAGGCAAGAATCATCATAATCATAATCATC
ATAAAACTCATCATAGTTATTTTGAGGAGAAAAATAATAATAATGGGGAGCATGAAGAAGGTGAAGATGATTATCAAAGCATAGTAGGAAGAGGA
GATTTGGGTGCTAATATAAGGTTTATGTGGATTTTCTAAATTTGTATCAATGTATAGTCAACAAGGTAAAAAAGGGATCAATCAAGATGCCATGA
CTGTTTGGGAGAACTTTGGTGGACAGAAAGGTATGATCTTTTGTGGTGTATTTGATGGACACGGACCATCCGGCCACAAAGTGGCACGTTATGTT
AGAGACACGTTACCTTCTAAACTTTCATCATCCAATGTGATCAGTGCCAATAGATGGGGTGCTCAAAAGGATGATGAATCTAACAACCCAGTCTT
CGATGCATGGAAAGATAAATTTATCAAGTCTTTTAAAGAAATGGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E549591] SGN-U573244 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T350466 [Download][View] Facility Assigned ID: TUS71N07_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.942 Expected Error Rate: 0.0041 Quality Trim Threshold: 14.5