EST details — SGN-E549617
| Search information |
| Request: 549617 | Match: SGN-E549617 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C169610 | Clone name: TUS-6-C16 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C25822 [cLEF-1-J5] | Trace: SGN-T59029 | EST: SGN-E243025 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C169610 [TUS-6-C16] | Trace: SGN-T350794 | EST: SGN-E549919 | Direction: 5' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E549617 | Length: 731 bp (772 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E549617 [] (trimmed)
CATTCCTATTGAAATACATTGCCTTATGTCCAAAGCAGTTTTAGATAATCTCCCACAGAAAATATTGACGATAGCAACATAACTATATGCCAGCA
AAAATAAGAAATAAATTATCTATGGAAGACGCGAGATACTGATCACAAGTGCCATAATAGTAGTTGCTTCCTCACCTTGCATCGAATTCAACCGA
CCTGAAAAACATATTTCATCCACTAGAATGTGGTGTGGAGCTGTCAACTCATTTGTCAGCGGCAACTGAATCCGGAGAAGAAAGGGAGTCCTTTA
GGAGCCCAGCATCATCTACCACAATATCCAGTACCTCAGCATTGTGTGCTTTCGACTCTCCATTCTGGATGCCTCTCAATGTCTCCAGCACTTCT
TGCATTGAAGGTCTCAGATCTCTCTCTTGTTGCAGACATCGGAAAGCTAACTCTGCGACTAATGTAGTCATCCTCCTCACGGAGCTGTTTGTTGA
GAATCCAAGAGTTGGATCAACTAATTCATGAATTGAATGACCTTGGATCTTGTTGACAGCCATATTAGACAAATTAATATCATGGCGGTGCCTGT
TGGTATCCACAGCTTCTAATGATGAGATCAGCTCTACCAACACCACCCCAAAACTATAGACATCACTCTTTTCAGTGAGCTGGTAACATTGGTAG
TATTCAGGATCAACGTAGCCTGGTGTACCCTGTGGAGCAGTAGAGACATGTGTGACATTATTTGGG
AAAATAAGAAATAAATTATCTATGGAAGACGCGAGATACTGATCACAAGTGCCATAATAGTAGTTGCTTCCTCACCTTGCATCGAATTCAACCGA
CCTGAAAAACATATTTCATCCACTAGAATGTGGTGTGGAGCTGTCAACTCATTTGTCAGCGGCAACTGAATCCGGAGAAGAAAGGGAGTCCTTTA
GGAGCCCAGCATCATCTACCACAATATCCAGTACCTCAGCATTGTGTGCTTTCGACTCTCCATTCTGGATGCCTCTCAATGTCTCCAGCACTTCT
TGCATTGAAGGTCTCAGATCTCTCTCTTGTTGCAGACATCGGAAAGCTAACTCTGCGACTAATGTAGTCATCCTCCTCACGGAGCTGTTTGTTGA
GAATCCAAGAGTTGGATCAACTAATTCATGAATTGAATGACCTTGGATCTTGTTGACAGCCATATTAGACAAATTAATATCATGGCGGTGCCTGT
TGGTATCCACAGCTTCTAATGATGAGATCAGCTCTACCAACACCACCCCAAAACTATAGACATCACTCTTTTCAGTGAGCTGGTAACATTGGTAG
TATTCAGGATCAACGTAGCCTGGTGTACCCTGTGGAGCAGTAGAGACATGTGTGACATTATTTGGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E549617] | SGN-U569715 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T350492 [Download] [View] | Facility Assigned ID: AGT-287_F06_TUS6#2-C4.Td_057 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.977 | Expected Error Rate: 0.0020 | Quality Trim Threshold: 20.5 |
Working
