EST details — SGN-E549637
| Search information |
| Request: 549637 | Match: SGN-E549637 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C169598 | Clone name: TUS-6-C4 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C169598 [TUS-6-C4] | Trace: SGN-T350673 | EST: SGN-E549798 | Direction: 5' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E549637 | Length: 336 bp (796 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E549637 [] (trimmed)
GATTATAACACTGAATTTTCCTTCCGAAACGAACAACTGCCAAACAAATCTCTAGCAAATACATTCAATAAAAAAACCTAAAGAATTTTGAGGTA
AAGATAAAAAAAAAAGTGGATGTATACAATTATTTAAGCTCTATGGAAATCATTGTGCAATGGGGAATTTGGAGTTAATTTCTTATGTAGACTTT
TTGTATTGGTATTTGTTTTGTTGAGAAATTCCCTTTGAGGACTTCGTTTGTGTTGATCAAGTACTGGAGCTATATAGACAATTTTCCTTGTTGAA
ATATCCTTATAATCCTTCAATGTTTCAAGTGTTTTGACAACTGAAGNCTTT
AAGATAAAAAAAAAAGTGGATGTATACAATTATTTAAGCTCTATGGAAATCATTGTGCAATGGGGAATTTGGAGTTAATTTCTTATGTAGACTTT
TTGTATTGGTATTTGTTTTGTTGAGAAATTCCCTTTGAGGACTTCGTTTGTGTTGATCAAGTACTGGAGCTATATAGACAATTTTCCTTGTTGAA
ATATCCTTATAATCCTTCAATGTTTCAAGTGTTTTGACAACTGAAGNCTTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E549637] | SGN-U569230 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T350512 [Download] [View] | Facility Assigned ID: AGT-290_F05_TUS6#1-C4.Td_045 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.908 | Expected Error Rate: 0.0096 | Quality Trim Threshold: 20.5 |
Working
