EST details — SGN-E549826

Search information 
Request: 549826Match: SGN-E549826
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C169603Clone name: TUS-6-C9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C21401 [cLED-33-I6] Trace: SGN-T56973 EST: SGN-E239700 Direction: 5' Facility: TIGR
Clone: SGN-C169603 [TUS-6-C9] Trace: SGN-T350505 EST: SGN-E549630 Direction: 3' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E549826Length: 660 bp (799 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E549826 [] (trimmed) CTTCGCCTGATAGGCGTCAAAAGAGGCTTGTTTTTCAGGTCTGTACTGCTAAGATGAACCTAGGTGACGAGGTTGACTTGGAAGATTATGTTTCT
CGCCCTGATAAAATTAGTGCTGCTGAGGTTTGTCTCTTTATACTTCATCTATTTTTTCGACTGATAACAGGATTCTTCACTATTGATTCAAAATG
TTGATGTCTACTGTTACAACTAAGAGTAGTTCTTTATTTTGCTTCATCTGCTTTGGTCCTTCTATTTTTAAAATGTGAATGATCTTTATAATTGA
AGAGTCAATTTGACCAACACGACTGTGATGCACATGTTGCAATGTCTACAGATTGCAGCTATATGTCAGGAAGCAGGTATGCATGCAGTGCGAAA
GAATCGATATGTCATACTCCCCAAGGACTTTGAAAAGGGTTACAGGACCAATGTGAAGAAGCCGGACACTGACTTCGAGTTCTATAAGTGATCTG
TAAAAGTAGATGAGCTAATATTTTTAGAGGTTGACCTTGTACACTCAATATGAAAATTCTTTTTAATATGTTTTTAATGGTACTGCTGGTTTGTC
AAACGTCTGCTGGTTTGTACCGTTCTAGATTCCATTATTTGTTCGTTCAGAAAGTGCAGCGTGAGCAGTCTAATTATCCATTTAAGCTGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E549826] SGN-U573935 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T350701 [Download] [View] Facility Assigned ID: AGT-286_C09_TUS6#1-C9.T3_055
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0063 Quality Trim Threshold: 14.5