EST details — SGN-E549863
| Search information |
| Request: 549863 | Match: SGN-E549863 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C169851 | Clone name: TUS-6-M17 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C22214 [cLED-37-D12] | Trace: SGN-T57966 | EST: SGN-E242145 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C169851 [TUS-6-M17] | Trace: SGN-T351408 | EST: SGN-E550533 | Direction: 3' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E549863 | Length: 559 bp (789 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E549863 [] (trimmed)
AACGATATCTCCTATGTCTTCTCTGGGTATGCACCTCTCATTATTCGCCTAGTTCAACATGCAATTCGATCTGGGTGGCGACCTATTGAAGAAAT
ACTGAAGTTGCTGCCAGGTCCACACTCAGATATTAAGAGGGGTGGATTTTCCAGTAGTCCGTCGCTGGACTCATTAAACGGGTCTTTGCATAACT
CAGACAAAGTTGTTGATGGAAGGCGTTCTTTGGTTCTTGTCGTTTTCATTGGTGGAGTAACATCTGCAGAGATCTCTGCTCTTCGCTTCCTGAGC
GCCCAGGAAGGGATGGCATATGACATAATTGTAGCAACTACAAAAATTGTCAATGGAAGCACATTGACAGAAACATTTGTGGAGAAATTGGGATG
ATCTGCTAAGACTTATTTGGTCGATTATCACTGGGGAATCTCAGCTGCTTGCGCGATAGGGACCCATAGTTTTTGATGCTACATTTTTATATACA
TGTGAGAAGGTCAGTAGACTTAACTTGTGATGAACACAGTTATGTTTTCTTTATTAAGGTATTGGCTAAGAACGCCCTGTGTGC
ACTGAAGTTGCTGCCAGGTCCACACTCAGATATTAAGAGGGGTGGATTTTCCAGTAGTCCGTCGCTGGACTCATTAAACGGGTCTTTGCATAACT
CAGACAAAGTTGTTGATGGAAGGCGTTCTTTGGTTCTTGTCGTTTTCATTGGTGGAGTAACATCTGCAGAGATCTCTGCTCTTCGCTTCCTGAGC
GCCCAGGAAGGGATGGCATATGACATAATTGTAGCAACTACAAAAATTGTCAATGGAAGCACATTGACAGAAACATTTGTGGAGAAATTGGGATG
ATCTGCTAAGACTTATTTGGTCGATTATCACTGGGGAATCTCAGCTGCTTGCGCGATAGGGACCCATAGTTTTTGATGCTACATTTTTATATACA
TGTGAGAAGGTCAGTAGACTTAACTTGTGATGAACACAGTTATGTTTTCTTTATTAAGGTATTGGCTAAGAACGCCCTGTGTGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E549863] | SGN-U566649 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T350738 [Download] [View] | Facility Assigned ID: AGT-283_E05_TUS6#4-E5.T3_037 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.973 | Expected Error Rate: 0.0092 | Quality Trim Threshold: 20.5 |
Working
