EST details — SGN-E549875
| Search information |
| Request: 549875 | Match: SGN-E549875 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C169921 | Clone name: TUS-6-P15 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C169921 [TUS-6-P15] | Trace: SGN-T351403 | EST: SGN-E550528 | Direction: 3' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E549875 | Length: 724 bp (788 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E549875 [] (trimmed)
CGGGCTGCAGGTTGCATTGCGCTAAACAAACAAAAAATATAAACAATTTGCTATTTTCGTTTAGCAATGGTTGACATTTAATCTTTTTTATCCAT
GTCCTCAGATTTCTGCGCTTTTTCGTTACGCTACTCTTGTTATGGAGTTCTCTTCTGAATTCGATCATGGAATTAGGGCTCAGGTTTCGTCTCAT
TCTTCGAGAGTTAGAGGAAAGTGTTGACCTATCTTCTACTTCTAAGCTATGGTTCGCCAGTCTGATTTCGATTGATCCGATAATCAGGTCCGAAA
TATACGGTTCTTCCTGAAGACAGAAGGCATAAACTGTGGAAAAGGTTGAAAACTTCAGCACTTGGCTGATGGATAGATGCAATAATGGTTCTTCC
CTCTCTTTGACGTGAAATTCCGCTCATCACGTAATAAGATGCAGCACTGTCGAGGCCGCTGGTTGGTTCATCAAGGAAAAGAAGTTTTGGCCGCG
TTAGAATCTCCATGCAAACACTAAGTCTTCTCTTTTCTCCTCCACTAATTCCTTTATTACCAAATCCTCCAATTCTTGTGTTCATTGCATCTTGC
AACCCCATCTCCTTAATAGTCTGCTCTGCTATTTGTTTTTTCTCTGATTTTGTCATGGAAACTGGGAGTTGGAGTTGTGCAGAGTAGTAAACTGC
TTCTTGAACTGTTAGTGTTGCTAACAGAGTTTCATCTTGAGTCACATATGCCTGATTTT
GTCCTCAGATTTCTGCGCTTTTTCGTTACGCTACTCTTGTTATGGAGTTCTCTTCTGAATTCGATCATGGAATTAGGGCTCAGGTTTCGTCTCAT
TCTTCGAGAGTTAGAGGAAAGTGTTGACCTATCTTCTACTTCTAAGCTATGGTTCGCCAGTCTGATTTCGATTGATCCGATAATCAGGTCCGAAA
TATACGGTTCTTCCTGAAGACAGAAGGCATAAACTGTGGAAAAGGTTGAAAACTTCAGCACTTGGCTGATGGATAGATGCAATAATGGTTCTTCC
CTCTCTTTGACGTGAAATTCCGCTCATCACGTAATAAGATGCAGCACTGTCGAGGCCGCTGGTTGGTTCATCAAGGAAAAGAAGTTTTGGCCGCG
TTAGAATCTCCATGCAAACACTAAGTCTTCTCTTTTCTCCTCCACTAATTCCTTTATTACCAAATCCTCCAATTCTTGTGTTCATTGCATCTTGC
AACCCCATCTCCTTAATAGTCTGCTCTGCTATTTGTTTTTTCTCTGATTTTGTCATGGAAACTGGGAGTTGGAGTTGTGCAGAGTAGTAAACTGC
TTCTTGAACTGTTAGTGTTGCTAACAGAGTTTCATCTTGAGTCACATATGCCTGATTTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E549875] | SGN-U573391 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T350750 [Download] [View] | Facility Assigned ID: AGT-283_H03_TUS6#4-H3.T3_030 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.964 | Expected Error Rate: 0.0077 | Quality Trim Threshold: 20.5 |
Working
