EST details — SGN-E549991

Search information 
Request: 549991Match: SGN-E549991
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C169520Clone name: TUS-5-O22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C18372 [cLED-23-B24] Trace: SGN-T54453 EST: SGN-E239488 Direction: 5' Facility: TIGR
Clone: SGN-C169520 [TUS-5-O22] Trace: SGN-T351152 EST: SGN-E550277 Direction: 3' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E549991Length: 697 bp (801 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E549991 [] (trimmed) CGCACCAGAGTCCATTTTTCTCTTCTTCTTCTTCCTCTCTTCTGTGGAGACTGATGAGACTTCATTTTTTCCCCCACTTCTCATGCATTACAACT
CTATAGAAAAATACAACAAAAAAGAATTAATCTTTGGGTGTTCATAACTGATAAAAGGTGTAAAGGAAAAAGAAAATACCCAAAAAATAGAAAAT
AAAAATGGTGAACTATTATATGTTCTTTTTCATATTTTTGTCTTGTATTCTTGTTTTGGTTTCTGGGTTTTCAAGAAATCTGCCAATTTTAGCTT
TTGATGAAGGTTACTCTCATTTATTTGGTGATAATAATCTTATGATCCTTAAAGATGGAAAATCAGTTCATATTTCTCTTGACAAAAGAACAGGG
GCTGGATTTGTGTCTCAAGACCTTTATTTTCATGGATTTTTTAGTGCTTCTATTAAGTTACCTGCAGATTATACAGCTGGTGTTGTTGTTGCATT
TTATATGTCTAATGGGGATATGTTTGAGAAGAACCATGATGAAATTGATTTTGAGTTTTTGGGAAATATTAGAGGCAAAGACTGGAGAATTCAGA
CTAATATTTATGGGAATGGTAGCACAAATGTTGGCAGAGAAGAAAGATATGGACTTTGGTTTGATCCTTCTGAAGATTTTCATCAATACAGTATC
CTTTGGACTGAGAATTTGATCATCTTTTATGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E549991] SGN-U575876 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T350866 [Download] [View] Facility Assigned ID: AGT-277_G10_TUS5#4-G10.T3_082
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.919 Expected Error Rate: 0.0057 Quality Trim Threshold: 14.5