EST details — SGN-E550004

Search information 
Request: 550004Match: SGN-E550004
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C169503Clone name: TUS-5-O5
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C169503 [TUS-5-O5] Trace: SGN-T351256 EST: SGN-E550381 Direction: 3' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E550004Length: 566 bp (794 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E550004 [] (trimmed) CAGCAACGCCAATCCTCCTTCCATGGCTTTGACAATTCATCTTCTTTATCCAAATCGTTTCCCTTCACAATTCACAAACTCCCAAACCAATTTGG
TCCCTTCGATGTATACCTTCAAGAATCATCCCAAGTTTCACAAAGTCTCGTGCACCAACAACGACGACGACATGAACGATATTGACCTGGCATCA
GATTTTGCAACAGAGGTTGGAAAGATGAACACCCAGATGATACAGAAAGAGGAAGCGTTGAAGAAAAGCAAAGAGCTTTTGTTCGTTGAGTTTTG
CCACTACACGGGATTGAAATCGGAGGAAATGAAGAAGAAATGGAAGAAGTTCAGTGAGGAGGAACAATGGGATTTGGTTAAAAGTTTTGTTTTAG
AATGGGGTGCCCATTTTCATCCATTATCTGCGAGGTCTGTTAAAGAATTAGTCGATGAGTACTTAGTTGAAAACATTTCTGAGTTCAATTCTTCT
ACTTCTTCTTCTTCTTCTTCTTTTTTCCCTGGTCTCAAAAAAATTGATGGGATTTTCAGGGGATGATAATGAATAAATTGGATTTTCAGTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E550004] SGN-U581176 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T350879 [Download] [View] Facility Assigned ID: AGT-274_A10_Tus5#3-G5.T3_071
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.950 Expected Error Rate: 0.0006 Quality Trim Threshold: 12.5