EST details — SGN-E550004
| Search information |
| Request: 550004 | Match: SGN-E550004 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C169503 | Clone name: TUS-5-O5 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C169503 [TUS-5-O5] | Trace: SGN-T351256 | EST: SGN-E550381 | Direction: 3' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E550004 | Length: 566 bp (794 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E550004 [] (trimmed)
CAGCAACGCCAATCCTCCTTCCATGGCTTTGACAATTCATCTTCTTTATCCAAATCGTTTCCCTTCACAATTCACAAACTCCCAAACCAATTTGG
TCCCTTCGATGTATACCTTCAAGAATCATCCCAAGTTTCACAAAGTCTCGTGCACCAACAACGACGACGACATGAACGATATTGACCTGGCATCA
GATTTTGCAACAGAGGTTGGAAAGATGAACACCCAGATGATACAGAAAGAGGAAGCGTTGAAGAAAAGCAAAGAGCTTTTGTTCGTTGAGTTTTG
CCACTACACGGGATTGAAATCGGAGGAAATGAAGAAGAAATGGAAGAAGTTCAGTGAGGAGGAACAATGGGATTTGGTTAAAAGTTTTGTTTTAG
AATGGGGTGCCCATTTTCATCCATTATCTGCGAGGTCTGTTAAAGAATTAGTCGATGAGTACTTAGTTGAAAACATTTCTGAGTTCAATTCTTCT
ACTTCTTCTTCTTCTTCTTCTTTTTTCCCTGGTCTCAAAAAAATTGATGGGATTTTCAGGGGATGATAATGAATAAATTGGATTTTCAGTT
TCCCTTCGATGTATACCTTCAAGAATCATCCCAAGTTTCACAAAGTCTCGTGCACCAACAACGACGACGACATGAACGATATTGACCTGGCATCA
GATTTTGCAACAGAGGTTGGAAAGATGAACACCCAGATGATACAGAAAGAGGAAGCGTTGAAGAAAAGCAAAGAGCTTTTGTTCGTTGAGTTTTG
CCACTACACGGGATTGAAATCGGAGGAAATGAAGAAGAAATGGAAGAAGTTCAGTGAGGAGGAACAATGGGATTTGGTTAAAAGTTTTGTTTTAG
AATGGGGTGCCCATTTTCATCCATTATCTGCGAGGTCTGTTAAAGAATTAGTCGATGAGTACTTAGTTGAAAACATTTCTGAGTTCAATTCTTCT
ACTTCTTCTTCTTCTTCTTCTTTTTTCCCTGGTCTCAAAAAAATTGATGGGATTTTCAGGGGATGATAATGAATAAATTGGATTTTCAGTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E550004] | SGN-U581176 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T350879 [Download] [View] | Facility Assigned ID: AGT-274_A10_Tus5#3-G5.T3_071 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.950 | Expected Error Rate: 0.0006 | Quality Trim Threshold: 12.5 |
Working
