EST details — SGN-E550027
| Search information |
| Request: 550027 | Match: SGN-E550027 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C169383 | Clone name: TUS-5-J5 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C18971 [cLED-25-C4] | Trace: SGN-T55129 | EST: SGN-E240338 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C169383 [TUS-5-J5] | Trace: SGN-T351220 | EST: SGN-E550345 | Direction: 3' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E550027 | Length: 493 bp (795 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E550027 [] (trimmed)
GGGAGTTCTGTTGCTGGAGATTCTCACCGGGAAAGAAGTTTCCGCTTTATATGAAGGTTCAAACACAAACTTGGCTGAGTTGTTGATCCCGGTGC
TTAATGATGATAATGCAAAGGAGAGTTTGAGCAACTTCGTTGACCCTTCTCTGCAAGGGAAGTACCCTGTGGAACTTGCTTTTGCCATGGTCAGA
TTGATCGATAACTGCCTAATGAAAGATCCCTCACATCGCCCTAATACGGATGAGATTGTGCAATCTGTTTCAAGAATTATGACAGCCACACACTC
ATGGGAAACGTCATTTAGCACTTCAGTGTCACCACATAGATTGCCCTAGATCAATGATTGTTTTTCTTTGTTGTTTATTTTGTTTTTGTTTTTTC
CTCCTTCCACATCTAGCATGATTTGTTATGTGCAATTGTTATTACCTTGTTTATGAATTTGGAAGAGCTATTGCACCATTTATCCTACATAAAAA
TCAGTTTAACATTTCAGT
TTAATGATGATAATGCAAAGGAGAGTTTGAGCAACTTCGTTGACCCTTCTCTGCAAGGGAAGTACCCTGTGGAACTTGCTTTTGCCATGGTCAGA
TTGATCGATAACTGCCTAATGAAAGATCCCTCACATCGCCCTAATACGGATGAGATTGTGCAATCTGTTTCAAGAATTATGACAGCCACACACTC
ATGGGAAACGTCATTTAGCACTTCAGTGTCACCACATAGATTGCCCTAGATCAATGATTGTTTTTCTTTGTTGTTTATTTTGTTTTTGTTTTTTC
CTCCTTCCACATCTAGCATGATTTGTTATGTGCAATTGTTATTACCTTGTTTATGAATTTGGAAGAGCTATTGCACCATTTATCCTACATAAAAA
TCAGTTTAACATTTCAGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E550027] | SGN-U564297 | Tomato 200607 | Build 2 | 60 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T350902 [Download] [View] | Facility Assigned ID: AGT-274_E02_Tus5#3-B5.T3_017 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.974 | Expected Error Rate: 0.0120 | Quality Trim Threshold: 14.5 |
Working
