EST details — SGN-E550120

Search information 
Request: 550120Match: SGN-E550120
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C328599Clone name: TUS-5-F30
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C328599 [TUS-5-F30] Trace: SGN-T350996 EST: SGN-E550121 Direction: 3' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E550120Length: 670 bp (796 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E550120 [] (trimmed) TGGATCGACGGGCTGCAGGCTTCTCTTCAATTTTTATTTTTAAAAAATGTCTCCATCATTGGCAAAATCTAGTGAAAAATTGAAGAATGAAATTG
AAGATTATCATAAAGGAGTAAAGTATTTGCATGAAAGTGGAATTCAAAAAGTTCCAAAGAAATACATTTTTCCTATTTCAGAAAGACCAAATTGT
TATACTATAAATGAAAATCCACAAGTTGCTAGCAAACACAATCTTAAGTTGCCTGTCATAGATTTTTCTCAACTCTATGGTCCTAATAGAGCTCA
AGTTCTTGATTCACTCTCCTATGCCTGTGAAAACTATGGATTTTTTCAGTTGACAAACCATGGGATTCCAGAAGAGGTAATAAAAAATATGGTGG
ATGTTGGAGGAAGGTTTTTTGATCTTCCATTAGTAGAAAGGGAAAAGTACATGACAAAAGACATGACAACACCAGTTAGATATGGGACAAGTTTT
AATCAAACAAAAGATGGTGTCTTTTGTTGGAGGGACTTTCTCAAGCTTGTTTGTGACCCTCTTCCTCAAGTCCTTCCTCATTGGCCTTCTTCTCC
TTCTTATTTTAGGGAAATGGCAGTTACATACTCTAAAGAGACCAAAATCTTATTTATAAAGTTAGTGGGAGCCATCCTAGAAAGTCTTGGAATTA
ACGTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E550120] SGN-U576069 Tomato 200607 Build 2 17 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T350995 [Download] [View] Facility Assigned ID: AGT-259_F06_TUS05#2-F18.T3_057
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.947 Expected Error Rate: 0.0159 Quality Trim Threshold: 14.5