EST details — SGN-E550187

Search information 
Request: 550187Match: SGN-E550187
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C169308Clone name: TUS-5-G2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C169308 [TUS-5-G2] Trace: SGN-T351310 EST: SGN-E550435 Direction: 3' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E550187Length: 716 bp (786 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E550187 [] (trimmed) ACGAGAGATCACTACCTTTCTCCTAATTTTTGCATCTTCTTAGTTCTCTCTGTTCTGAAAATTTTTCTTTAGAAAAAACACACACAAAAAAAAAT
AAAAATGGGAAGAGCACCATGTTGTGCTAAAGAAGGATTGCGTAAAGGGCCATGGTCTACTAAAGAAGATTTATTACTTACTAATTATATCAATC
AATATGGTGAAGGCCAATGGAGATCTTTGCCTAAAAATGCTGGATTGCTTAGGTGTGGGAAAAGTTGTAGATTAAGATGGGTGAATTATTTAAAG
CCAGGGATTAAAAGAGGAAATTTTAGTGAAGATGAAGAAGATCTTATAGTGAGATTACATTCACTTCTGGGTAATCGTTGGTCATTAATTGCCGG
ACGATTACCTGGTCGAACAGATAATGAAATCAAGAATTATTGGAATACGCATTTGACCAAGAAGCTCAGAAGCACAGGAATTGAACCAAAACCCC
ACAAGAATTTGACCAAATTAAAGGAGAAATCAAGAAAACAAACCAAAAAGGAGAAATCAAGAAAAGAAGTGGGGAAGAAAAGCAATGATGAGAAG
TTGAAGGGTCAAATTGCACAAGTTGAGAAGAATAAAGTATTTGCACCAAAGCCCATAAGGATTTCTTGTGGGATTTCAAGGAACAATAGTTTTGA
AAATGATACATTGAGTACTACTACTTNGTCCTCAAATAGTAATTTTGAAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E550187] SGN-U574376 Tomato 200607 Build 2 10 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T351062 [Download] [View] Facility Assigned ID: AGT-257_G02_TUS05#1-G2.T3_018
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.941 Expected Error Rate: 0.0120 Quality Trim Threshold: 14.5