EST details — SGN-E550236

Search information 
Request: 550236Match: SGN-E550236
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C169469Clone name: TUS-5-M19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C169469 [TUS-5-M19] Trace: SGN-T350845 EST: SGN-E549970 Direction: 5' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E550236Length: 620 bp (796 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E550236 [] (trimmed) TTATTAAAACAGTTTCTCGGTGATTAGTAAAGTTGTCTCCTTGAATTTCACTAAAGCTTCTACTATTAGCTAAGCTGGTGACCACAACACCGCAG
TCGATATGATTTTTTTTTTTCATATAAATTCATTGGGAATCTTTACCCAGAAATATCAAACCTAAGGAAAATGAAACTATAATATCCTCAAGCAG
ACTGTAGAGATGAAGTGAATTAATTCCCTCCGCCATCTCCATAAAATTGCACAAGGCTAATCGGGGTTACATTGATTCTTATCTCAAATAATTTG
ATTGAGAAAATCTTTTTCCAAGCTGTTTGATTCTTAAATAAAGGATTCAAGAGTCATTAGTTGCAGAAGAATTCTCCTTAAACACCTTAGTACCA
CCATCGACTGCATCAGTAAGCATACCACTTCCCAAATTCACAACATCGGACACATTACGAACCTCATGGGCAGGTGGAGCATAAGAGGTCAACGG
ACTCTCCATTTGAGCTGTAGCACCTCCAACTGGAGGCTCATTTCTGATAGAATTCCCACCTAAGATATCTGCTTGCTGGAAGTCGCTCACATTGG
TTTCTGAAGGTCTTGTAGCTTCTCTAACAGAATTATGGTCGCCATTCTGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E550236] SGN-U580268 Tomato 200607 Build 2 19 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T351111 [Download] [View] Facility Assigned ID: AGT-279_E05_TUS5#4-E7.Td_037
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0045 Quality Trim Threshold: 14.5