EST details — SGN-E550289
Search information |
Request: 550289 | Match: SGN-E550289 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C328548 | Clone name: TUS-5-A35 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E550289 | Length: 659 bp (801 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E550289 [] (trimmed)
GGAGAAATGCAAAGAGCAATGAAAGCAGTTGAAGAGATGGAAACTGTTGGGATCAAACCTAACTTAAAGACCTATACCACTCTTATACATGGTTG
GGCACGGGCTTCTCTTCCCGAGAAGGGTTTGAAATGTTTTGAACAGATGAAGCAGTCTGGTTTGAAACCTGACAAAGCTGTATACCACTGTTTAA
TGACATCATTGTTGTCAAGGGCGGCAGTTGCTGATCAAGATTACATTATAACGAGAATCCAACATGTTTGTGAAGAGATGGTGGAGTCTGGATTG
ACTGTTGATATGGGAACTGCAGTTCATTGGTCCAAGTGCTTGAGAAAAATTGAGAGGACTGGTGGTGATATAACAAAATCCCTTCAAAAGACCTT
CCCACCTGATTGGAGTTCTCACCGAACTCTTAATGGAACATCAAATGACAACGAGATTGAGGAAGGGTCAGACAGTAGTGACGATGAACGTAGTT
CTTTTTATGAGATAAAGAAATGCTAACAATGATTCAGATTTCTACGAAGAGGCATTGGCATAATCTTTATCAGCCCTAGCTGCTGCTTGGTCCCC
AGAGTCTTTAGGTGTATAGATGGAATTTTGCCACTAGTTTGGCTTGGATCAGATTGTTTTATTTTTTCGNTAACAACCTCTCTATTTCT
GGCACGGGCTTCTCTTCCCGAGAAGGGTTTGAAATGTTTTGAACAGATGAAGCAGTCTGGTTTGAAACCTGACAAAGCTGTATACCACTGTTTAA
TGACATCATTGTTGTCAAGGGCGGCAGTTGCTGATCAAGATTACATTATAACGAGAATCCAACATGTTTGTGAAGAGATGGTGGAGTCTGGATTG
ACTGTTGATATGGGAACTGCAGTTCATTGGTCCAAGTGCTTGAGAAAAATTGAGAGGACTGGTGGTGATATAACAAAATCCCTTCAAAAGACCTT
CCCACCTGATTGGAGTTCTCACCGAACTCTTAATGGAACATCAAATGACAACGAGATTGAGGAAGGGTCAGACAGTAGTGACGATGAACGTAGTT
CTTTTTATGAGATAAAGAAATGCTAACAATGATTCAGATTTCTACGAAGAGGCATTGGCATAATCTTTATCAGCCCTAGCTGCTGCTTGGTCCCC
AGAGTCTTTAGGTGTATAGATGGAATTTTGCCACTAGTTTGGCTTGGATCAGATTGTTTTATTTTTTCGNTAACAACCTCTCTATTTCT
Unigenes |
Current Unigene builds | |||||
[SGN-E550289] | SGN-U579339 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T351164 [Download] [View] | Facility Assigned ID: AGT-259_A11_TUS05#2-A23.T3_083 |
Submitter: Koni | Sequencing Facility: Avesthagen |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.975 | Expected Error Rate: 0.0110 | Quality Trim Threshold: 14.5 |