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EST details — SGN-E550313

Search information 
Request: 550313Match: SGN-E550313
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C328589Clone name: TUS-5-E31
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C328589 [TUS-5-E31] Trace: SGN-T350988 EST: SGN-E550113 Direction: 3' Facility: Avesthagen
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E550313Length: 714 bp (796 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E550313 [] (trimmed) GTGGATCGAACGGGCTGCAGGAATTTCGCACCAGCTTCGAAGTAAGTATTTTAAGTTTTGAACTAGTGTTACTTATCTTGTTGGGCACTGTTTTG
TTTGATTTTTAAAAGAAAAAATATTAAATGATCAAAAAAATTATAATATCTTTTTTGTTTTAAGGTTAAATAAATTGATTTAAAAATTTCATTTT
TAATTAAAAGAGGGTAGTAAAATGCTTAAAAAGCTAAAATAATTTAGTGTGAAATATATTATTTTATTATCATTCTAATCAAAATTTCTGGTCAC
ACCTTATAGCATAGGGGTTTCAGAGGGCCCCGAGATATTTTGTTTTGATCTTATATTTCTCGAATCTATGAAAATGTTATTCCACTAGTGTTTAT
ATTATTTTCTGAAATGCATATTTTTGAATGATTTGATATATGCTCAATATTTTCATGCAAAACTGAAAATGAATTTTGGTATTATTGACCGTATT
TGTATTGTTTTACTCTCCAAAAATATTATCGATCGCATCTATCTTTGTATTTATACAGGCTTGGACAAATGGTCGATTGCATTCACCTCTCCACA
GAGTAACAATGTCCGGACAAAATGATAGACTCTCCATTCAATTGTTTTCATTATCAAAGCCAGGTCACTTCATCCAGGCACCAAAGAACTAGTAG
ATGAAGAACACCCATTACTCTTCAAGCCATTTGAAATTCTTGAATTATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E550313] SGN-U577701 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T351188 [Download] [View] Facility Assigned ID: AGT-259_E07_TUS05#2-E19.T3_053
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.917 Expected Error Rate: 0.0084 Quality Trim Threshold: 14.5