EST details — SGN-E550338

Search information 
Request: 550338Match: SGN-E550338
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C169358Clone name: TUS-5-I4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C17754 [cLED-20-I5] Trace: SGN-T53789 EST: SGN-E236272 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E550338Length: 463 bp (783 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E550338 [] (trimmed) GATAAATGGTGCATATCTCTTCCAAATTCATAAACAAGGTAATAACAATTGCACATAACAAATCATGCTAGATGTGGAAGGAGGAAAAAACAAAA
ACAAAATAAACAACAAAGAAAAACAATCATTGATCTAGGGCAATCTATGTGGTGACACTGAAGTGCTAAATGACGTTTCCCATGAGTGTGTGGCT
GTCATAATTCTTGAAACAGATTGCACAATCTCATCCGTATTAGGGCGATGTGAGGGATCTTTCATTAGGCAGTTATCGATCAATCTGACCATGGC
AAAAGCAAGTTCCACAGGGTACTTCCCTTGCAGAGAAGGGTCAACGAAGTTGCTCAAACTCTCCTTTGCATTATCATCATTAAGCACCGGGATCA
ACAACTCAGCCAAGTTTGTGTTTGAACCTTCATATAAAGCGGAAACTTCTTTCCCGGTGAGAATCTCCAGCAACAGAACTCCC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E550338] SGN-U564297 Tomato 200607 Build 2 60 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T351213 [Download] [View] Facility Assigned ID: AGT-276_A04_TUS5#3-A4.Td_023
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.954 Expected Error Rate: 0.0023 Quality Trim Threshold: 14.5