EST details — SGN-E550348

Search information 
Request: 550348Match: SGN-E550348
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C169388Clone name: TUS-5-J10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C20249 [cLED-29-N16] Trace: SGN-T56306 EST: SGN-E240018 Direction: 5' Facility: TIGR
Clone: SGN-C169388 [TUS-5-J10] Trace: SGN-T350883 EST: SGN-E550008 Direction: 5' Facility: Avesthagen
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E550348Length: 703 bp (779 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E550348 [] (trimmed) CAATTCTTTTACGACACGATACATAATTCAAAAGTCAAACTTTTTAATTTTGACCATCAATTTGGACATATAACAGAATAGTTTAACTTTCAAAA
TTCAAAAGATGTCTCATAAACTGAGACAGACTAAATCTTGTTAGTCATATGGTGTAGCCACCAAATACAAGTTGTTTTTCATTGTAGCAGCAGCA
CCAAAACCTTCAGTCATATCTAAATCTTGTGGATTCATACCATTAGGAAGTGTCCAATCGAAATGATAAAGTAATCTAGCCAATGTGAGTTCACT
ACTTGCCGTAGCAAATAACATTCCTGGACAAACCCTTTTTCCAAATCCAAATGCCAAAAACTCCATAGGAACATTGGATGATCCTTTGATCATTT
TAACATCATTATCGACATAATTGTTGAATCGATCAGGCATGAATTTCTCTGGATCGTGCCAATATTCAGGATCTCTTCCCATTGCATACAAATTC
ATCAAGGCTATTGTTTTATTAGGTATAACATACCCATTAATCGCGATTTCCTCTATTGATTCTCTTGGTATAGCTAAGGGACCTGGAGGATGAAG
TCTTAGAGTTTCTTTCACAATCAATTTCAAGTATTTCAAATTTTGTACATCGATATGATCAACTTTCTTTTTCCCTTTTAAAACCTCTCTAACTT
CAACTTGGGCTTTTTTCATCATATTTGGATTTTTCAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E550348] SGN-U585201 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T351223 [Download] [View] Facility Assigned ID: AGT-276_B10_TUS5#3-B10.Td_079
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.945 Expected Error Rate: 0.0060 Quality Trim Threshold: 20.5