EST details — SGN-E550419

Search information 
Request: 550419Match: SGN-E550419
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C169244Clone name: TUS-5-D10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C19829 [cLED-28-D22] Trace: SGN-T56004 EST: SGN-E241526 Direction: 5' Facility: TIGR
Clone: SGN-C169244 [TUS-5-D10] Trace: SGN-T351321 EST: SGN-E550446 Direction: 5' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E550419Length: 782 bp (795 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E550419 [] (trimmed) TTCTATTTTTATCACAGTATTTCGGTACAACAGAATTAAGACATCCTACATCCTGGGTAACTTTGAACCTATATCAAATATAAGATACAATGAAC
CTTATAAAGAGGTAGTTCTCTTCCCGTTTTTATTACAGTAAGACAACAAAATTGTTAAGACATCCCACACCATGGGTAACTCAAATCTTTATCAA
ATATAACATCCAATAAACCTTGTAAAGAGGCAGTTCCCTTCCCATTTTTATTACAGTAGTAAGACAATAAAATTGGAGGAATGGTTCATTAACTT
AAAATGTAGCATATGAAGGAGCTGGCAAGAAAGGAAATGGAGCAACCGAGGCATATGCTACAGGTGGCCGGCGTTGACCATTTCCTATGGACTGC
TTTCTTTTTTCTTCTTGTGCCGCTTCTGCAGTTTCCAATGAAGGTGACAGCTCGATAATCTTACTCATGTGTTCAATAGTCATTTGCTGTTCACT
CTCGGTAACACGATGAACTAGAAGCCCAGACATAAATACAGGAAGATACAGAAGGCTGGCATGGAACATTCTCCTAGCATCTTTGGTTGTACGGT
TCAAGTAGAATGATATTGCTGTACCGCTGATTGCCAGAGCAAGAAGTGTCGATTCCAGGCAAAACCACCCAGATGTTAAACTCCCTGCACACACA
AGGTCGCCACAGAAGGTAGTCTAGATAGAAGCATGAAGAGCAAGGATTGAAACATTAGAACGTGCAATCAAACTAACAACCCNACACCAGATGTG
CACAATTCAGGTTCCATAATGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E550419] SGN-U575159 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T351294 [Download] [View] Facility Assigned ID: AGT-258_D10_TUS05#1-D10.Td_076
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.978 Expected Error Rate: 0.0022 Quality Trim Threshold: 20.5