EST details — SGN-E550470
| Search information |
| Request: 550470 | Match: SGN-E550470 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C169371 | Clone name: TUS-5-I17 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C16495 [cLED-16-L12] | Trace: SGN-T52656 | EST: SGN-E236083 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C169371 [TUS-5-I17] | Trace: SGN-T351351 | EST: SGN-E550476 | Direction: 3' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E550470 | Length: 718 bp (796 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E550470 [] (trimmed)
AAATCACTTTCTCAGACGTCTTCCGTGTTTTCTTTTCTCTGACGACGCGCAGCTATAGGAATTTCCCAGTCAAGCTCATTGGCTCCAGATTCAAG
CAAGGCCAAGAGTGCAGCTGCTTCCGTATTTGCTATTCTAGACAGGAAATCAAAAATAGATCCAAGTGATGAATCTGGTATGACACTGGACACAG
TGAAGGGAGATATTGAGCTGAAGCACGTAAGCTTTAAGTATCCGACAAGGCCAGATGTTCAAATTTTAAGAGACCTTTGTTTGACCATTCGCAGT
GGAAAGACGGTTGCTTTGGTTGGGGAGAGCGGATGTGGAAAGTCTACCGTAATATCATTGCTGCAAAGGTTTTATGATCCTGATTCAGGCCAGAT
TTCGTTGGACGGAATAGAAATTCAGAAGTTCCAGGTAAAATGGCTAAGGCAGCAAATGGGGCTTGTAAGCCAAGAGCCTGTGTTGTTCAACGACA
CAATTCGAGCCAATATTGCCTATGGAAAGGAAGGAAATGCAACAGAAGCAGAAGTTTTAGCAGCAGCCGAATTAGCAAACGCCCACAAGTTCATC
AGTGGTCTGCAACAGAGTTATGATACGACAGTGGGAGAACGAGGAACTCAACTGTCAGGTGGGCAGAAGCAACGAGTAGCTATAGCGAGGGCCAT
ATTGAAAAATCCAAAATCCTACTATTAGATGAGGCGACNAGCGCATTGGATGC
CAAGGCCAAGAGTGCAGCTGCTTCCGTATTTGCTATTCTAGACAGGAAATCAAAAATAGATCCAAGTGATGAATCTGGTATGACACTGGACACAG
TGAAGGGAGATATTGAGCTGAAGCACGTAAGCTTTAAGTATCCGACAAGGCCAGATGTTCAAATTTTAAGAGACCTTTGTTTGACCATTCGCAGT
GGAAAGACGGTTGCTTTGGTTGGGGAGAGCGGATGTGGAAAGTCTACCGTAATATCATTGCTGCAAAGGTTTTATGATCCTGATTCAGGCCAGAT
TTCGTTGGACGGAATAGAAATTCAGAAGTTCCAGGTAAAATGGCTAAGGCAGCAAATGGGGCTTGTAAGCCAAGAGCCTGTGTTGTTCAACGACA
CAATTCGAGCCAATATTGCCTATGGAAAGGAAGGAAATGCAACAGAAGCAGAAGTTTTAGCAGCAGCCGAATTAGCAAACGCCCACAAGTTCATC
AGTGGTCTGCAACAGAGTTATGATACGACAGTGGGAGAACGAGGAACTCAACTGTCAGGTGGGCAGAAGCAACGAGTAGCTATAGCGAGGGCCAT
ATTGAAAAATCCAAAATCCTACTATTAGATGAGGCGACNAGCGCATTGGATGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E550470] | SGN-U584047 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T351345 [Download] [View] | Facility Assigned ID: AGT-277_A05_TUS5#4-A5.T3_035 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.982 | Expected Error Rate: 0.0099 | Quality Trim Threshold: 14.5 |
Working
