EST details — SGN-E550533
| Search information |
| Request: 550533 | Match: SGN-E550533 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C169851 | Clone name: TUS-6-M17 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C22214 [cLED-37-D12] | Trace: SGN-T57966 | EST: SGN-E242145 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C169851 [TUS-6-M17] | Trace: SGN-T350738 | EST: SGN-E549863 | Direction: 5' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E550533 | Length: 595 bp (764 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E550533 [] (trimmed)
TCACACTTCATTCTTCCTACCACTCGAAGCACACAGGGCGTTCTTAGCCAATACCTTAATAAAGAAATCACCACTGTGTTCATTACAAGTTAAGT
CTACTGACCTTCTCACATGTATATAAAAATGTAGCATCAAAAACTATGGGTCCCTATCGCGCAAGCAGCTGAGATTCCCCAGTGATAATCGACCA
AATAAGTCTTAGCAGATCATCCCAATTTCTCCACAAATGTTTCTGTCAATGTGCTTCCATTGACAATTTTTGTAGTTGCTACAATTATGTCATAT
GCCATCCCTTCCTGGGCGCTCAGGAAGCGAAGAGCAGAGATCTCTGCAGATGTTACTCCACCAATGAAAACGACAAGAACCAAAGAACGCCTTCC
ATCAACAACTTTGTCTGAGTTATGCAAAGACCCGTTTAATGAGTCCAGCGACGGACTACTGGAAAATCCACCCCTCTTAATATCTGAGTGTGGAC
CTGGCAGCAACTTCAGTATTTCTTCAATAGGTCGCCACCCAGATCGAATTGCATGTTGAACTAGGCGAATACTGAGAGGTGCATACCCAGAGAAG
ACATAGGAGATATCGTTGGGACCTG
CTACTGACCTTCTCACATGTATATAAAAATGTAGCATCAAAAACTATGGGTCCCTATCGCGCAAGCAGCTGAGATTCCCCAGTGATAATCGACCA
AATAAGTCTTAGCAGATCATCCCAATTTCTCCACAAATGTTTCTGTCAATGTGCTTCCATTGACAATTTTTGTAGTTGCTACAATTATGTCATAT
GCCATCCCTTCCTGGGCGCTCAGGAAGCGAAGAGCAGAGATCTCTGCAGATGTTACTCCACCAATGAAAACGACAAGAACCAAAGAACGCCTTCC
ATCAACAACTTTGTCTGAGTTATGCAAAGACCCGTTTAATGAGTCCAGCGACGGACTACTGGAAAATCCACCCCTCTTAATATCTGAGTGTGGAC
CTGGCAGCAACTTCAGTATTTCTTCAATAGGTCGCCACCCAGATCGAATTGCATGTTGAACTAGGCGAATACTGAGAGGTGCATACCCAGAGAAG
ACATAGGAGATATCGTTGGGACCTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E550533] | SGN-U566649 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T351408 [Download] [View] | Facility Assigned ID: AGT-285_B10_TUS6#4-E5.Td_079 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.975 | Expected Error Rate: 0.0094 | Quality Trim Threshold: 14.5 |
Working
