EST details — SGN-E550622
| Search information |
| Request: 550622 | Match: SGN-E550622 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C171664 | Clone name: TUS-11-I6 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C61805 [cLEM-19-I16] | Trace: SGN-T86246 | EST: SGN-E272248 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E550622 | Length: 592 bp (723 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E550622 [] (trimmed)
GCTCATAAAAGTTGCAGAAACTAAGGAAAAACAACGCTACCTTCTCCATATTTCTTCGGTTTATCAAATCGATAATCATCAAAATAAAGTATGAA
GTTTTAAAGTTTGTCAGATCACCAAATTATAGTACAGATTAGCTCTAATTTGGATCCTTCACGTTTCACTCACCAATTTCATCTGATTCGCTTTT
GGAGAAACGAAAAAAGGAGTGAAGAATAAGAAGAGAAAAGGCAAAAGGCATAATGGGACAAGCTTTTCGCAAGCTATTTGATACTTTCTTCGGCA
ACTCTGAGATGAGGGTTGTGATGCTAGGGCTGGATGCGGCTGGGAAAACAACTATATTGTACAAGCTGCATATAGGAGAAGTTCTGTCTACAGTT
CCTACTATTGGTTTCAATGTAGAAAAAGTGCAGTACAAGAATGTGGTTTTTACTGTGTGGGACGTTGGAGGACAAGAGAAACTAAGACCACTTTG
GAGGCATTATTTCAATAACACAGATGGACTGATTTACGTCGTTGACTCTTTGGATCGAGAGAGAATCGGAAAGGCAAAGCAAGAGTTTCAGGCAA
TCATTAGAGATCCATTTATGCT
GTTTTAAAGTTTGTCAGATCACCAAATTATAGTACAGATTAGCTCTAATTTGGATCCTTCACGTTTCACTCACCAATTTCATCTGATTCGCTTTT
GGAGAAACGAAAAAAGGAGTGAAGAATAAGAAGAGAAAAGGCAAAAGGCATAATGGGACAAGCTTTTCGCAAGCTATTTGATACTTTCTTCGGCA
ACTCTGAGATGAGGGTTGTGATGCTAGGGCTGGATGCGGCTGGGAAAACAACTATATTGTACAAGCTGCATATAGGAGAAGTTCTGTCTACAGTT
CCTACTATTGGTTTCAATGTAGAAAAAGTGCAGTACAAGAATGTGGTTTTTACTGTGTGGGACGTTGGAGGACAAGAGAAACTAAGACCACTTTG
GAGGCATTATTTCAATAACACAGATGGACTGATTTACGTCGTTGACTCTTTGGATCGAGAGAGAATCGGAAAGGCAAAGCAAGAGTTTCAGGCAA
TCATTAGAGATCCATTTATGCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E550622] | SGN-U577084 | Tomato 200607 | Build 2 | 10 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T351497 [Download] [View] | Facility Assigned ID: TUS11I6_T3 |
| Submitter: Koni | Sequencing Facility: Giovanni |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.962 | Expected Error Rate: 0.0080 | Quality Trim Threshold: 14.5 |
Working
