EST details — SGN-E550622

Search information 
Request: 550622Match: SGN-E550622
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C171664Clone name: TUS-11-I6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C61805 [cLEM-19-I16] Trace: SGN-T86246 EST: SGN-E272248 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E550622Length: 592 bp (723 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E550622 [] (trimmed) GCTCATAAAAGTTGCAGAAACTAAGGAAAAACAACGCTACCTTCTCCATATTTCTTCGGTTTATCAAATCGATAATCATCAAAATAAAGTATGAA
GTTTTAAAGTTTGTCAGATCACCAAATTATAGTACAGATTAGCTCTAATTTGGATCCTTCACGTTTCACTCACCAATTTCATCTGATTCGCTTTT
GGAGAAACGAAAAAAGGAGTGAAGAATAAGAAGAGAAAAGGCAAAAGGCATAATGGGACAAGCTTTTCGCAAGCTATTTGATACTTTCTTCGGCA
ACTCTGAGATGAGGGTTGTGATGCTAGGGCTGGATGCGGCTGGGAAAACAACTATATTGTACAAGCTGCATATAGGAGAAGTTCTGTCTACAGTT
CCTACTATTGGTTTCAATGTAGAAAAAGTGCAGTACAAGAATGTGGTTTTTACTGTGTGGGACGTTGGAGGACAAGAGAAACTAAGACCACTTTG
GAGGCATTATTTCAATAACACAGATGGACTGATTTACGTCGTTGACTCTTTGGATCGAGAGAGAATCGGAAAGGCAAAGCAAGAGTTTCAGGCAA
TCATTAGAGATCCATTTATGCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E550622] SGN-U577084 Tomato 200607 Build 2 10 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T351497 [Download] [View] Facility Assigned ID: TUS11I6_T3
Submitter: Koni Sequencing Facility: Giovanni
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.962 Expected Error Rate: 0.0080 Quality Trim Threshold: 14.5