EST details — SGN-E550793
Search information |
Request: 550793 | Match: SGN-E550793 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C186725 | Clone name: TUS-50-L19 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C8984 [cLEC-54-B14] | Trace: SGN-T32856 | EST: SGN-E209547 | Direction: 5' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E550793 | Length: 644 bp (749 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E550793 [] (trimmed)
TTAAGCATGCAGCCAACTCAAGAACCACTTGGATGAACTTGGTGATCAATTATTCACTGGCATTTGCAACTATTGTCCACAACAATTCAAATCAA
GAGAACAAAAACATAAGGCATTCAATATTTTTGATCCACAACCCAACATCTTTAGCAGCTTTCCATCAGCAACAACCAAAAATGGTGTAACTGTG
ATATGTTCAAAAAGAGGTGGAGATTTAACAGCAAATACACATAGTGAATGGCTTCTAACAGTGCCTTCAATGCCAGATGCTATTGCCTTTAACTT
CATTCCTATTACTTCACTTCTCAAAGGTGTTCCTGGCAAGGGCTTTTTATCACATGCTATCAACCTTTATCTTAGATATAAGCCACCCATAGCAG
ATTTGCAATATTTTCTGGATTTTCAAGCCCACAAAATTTGGGCTCCTATTCACAATGATCTTCCTTTAGGCCCAACTACAAATAGGTCCATTAGA
CCTCCAGCCATTCATTTCAATTTGATGGGCCCAAAGCTATATGTAAACCCAACTCAGGTAATAGTTGGGAAGACACCTGTAACTGGAATACGACT
TTATCTTGAAGGAGTAAAGTGTGATAGGCTGGCCATACATTTACAACACTTGATAAACACTCCAGTACTCCTAC
GAGAACAAAAACATAAGGCATTCAATATTTTTGATCCACAACCCAACATCTTTAGCAGCTTTCCATCAGCAACAACCAAAAATGGTGTAACTGTG
ATATGTTCAAAAAGAGGTGGAGATTTAACAGCAAATACACATAGTGAATGGCTTCTAACAGTGCCTTCAATGCCAGATGCTATTGCCTTTAACTT
CATTCCTATTACTTCACTTCTCAAAGGTGTTCCTGGCAAGGGCTTTTTATCACATGCTATCAACCTTTATCTTAGATATAAGCCACCCATAGCAG
ATTTGCAATATTTTCTGGATTTTCAAGCCCACAAAATTTGGGCTCCTATTCACAATGATCTTCCTTTAGGCCCAACTACAAATAGGTCCATTAGA
CCTCCAGCCATTCATTTCAATTTGATGGGCCCAAAGCTATATGTAAACCCAACTCAGGTAATAGTTGGGAAGACACCTGTAACTGGAATACGACT
TTATCTTGAAGGAGTAAAGTGTGATAGGCTGGCCATACATTTACAACACTTGATAAACACTCCAGTACTCCTAC
Unigenes |
Current Unigene builds | |||||
[SGN-E550793] | SGN-U568116 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T351668 [Download] [View] | Facility Assigned ID: TUS50L19_T3 |
Submitter: Koni | Sequencing Facility: Giovanni |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.948 | Expected Error Rate: 0.0015 | Quality Trim Threshold: 20.5 |