EST details — SGN-E550914
Search information |
Request: 550914 | Match: SGN-E550914 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C188114 | Clone name: TUS-54-F16 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C32984 [cLEG-24-N20] | Trace: SGN-T67718 | EST: SGN-E253470 | Direction: 5' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E550914 | Length: 530 bp (659 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E550914 [] (trimmed)
GGATGGTACCATCAGAGTGTGGAATATTAATGTACGTTATCACCTTTCTGAGGACCCCAAGACATTAAAGGTGTTCCCTATTCCCCTTAAGGATG
CAAGTGGCACAACTTTACACTATGATCGTTTATGTGTATCACCTGATGGAAAGATATTGGCCACCACTCATGGTTCAATGATGCAATGGCTATGT
ATGGAGACTGGGAAGGTTCTGGAAACAGCTGAAAAAGCACATGATGGTGATATCACGGACATGGCATGGTCGCCTTCTCCAATTCCAATGGGTGA
CAAGAAAGTTCTGGTGTTGGCCACAGCCAGTGTCGATAAGAAAGTGAAGTTGTGGGCAGCTCCATCCCTGAATGCATCATGAATGACAAGTATTT
GATGTCTCGCCTAGTTTTTTGAACGAATAGATCAGAAGAGGAGAATACAGCCGAAGTTCGAGGATTGAGTGCTTACATCTTTTAAGGGCTTTGTT
ATTTAAAGAGAGACTTAACCAGAATGTGGTGAAGCTAGAGAAAAATTTTGATGTT
CAAGTGGCACAACTTTACACTATGATCGTTTATGTGTATCACCTGATGGAAAGATATTGGCCACCACTCATGGTTCAATGATGCAATGGCTATGT
ATGGAGACTGGGAAGGTTCTGGAAACAGCTGAAAAAGCACATGATGGTGATATCACGGACATGGCATGGTCGCCTTCTCCAATTCCAATGGGTGA
CAAGAAAGTTCTGGTGTTGGCCACAGCCAGTGTCGATAAGAAAGTGAAGTTGTGGGCAGCTCCATCCCTGAATGCATCATGAATGACAAGTATTT
GATGTCTCGCCTAGTTTTTTGAACGAATAGATCAGAAGAGGAGAATACAGCCGAAGTTCGAGGATTGAGTGCTTACATCTTTTAAGGGCTTTGTT
ATTTAAAGAGAGACTTAACCAGAATGTGGTGAAGCTAGAGAAAAATTTTGATGTT
Unigenes |
Current Unigene builds | |||||
[SGN-E550914] | SGN-U573516 | Tomato 200607 | Build 2 | 17 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T351789 [Download] [View] | Facility Assigned ID: TUS54F16_T3 |
Submitter: Koni | Sequencing Facility: Giovanni |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.967 | Expected Error Rate: 0.0023 | Quality Trim Threshold: 14.5 |