EST details — SGN-E550963
| Search information |
| Request: 550963 | Match: SGN-E550963 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C188208 | Clone name: TUS-54-J14 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C36036 [cLEG-37-F5] | Trace: SGN-T70716 | EST: SGN-E256232 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E550963 | Length: 246 bp (678 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E550963 [] (trimmed)
TGGAATGCACAAGGAACAACAGTCGGACACTATAATCACAATTATTAGAAGCCACATCACCTCTAGTACTAGATACAGTTAAATATGTGACAGGA
CAATTTCCTCTAGAATGACTTTTGGTAACAAAGTTTAGCTACACATGATTATTGTAAACTGTTTACATTACCAATATTACAAGTCTTCAGAAGGC
ACCTCTTCTGGATTGATCCCGACATCAGGCATTGATAACTCTGTTTGATTGTCACT
CAATTTCCTCTAGAATGACTTTTGGTAACAAAGTTTAGCTACACATGATTATTGTAAACTGTTTACATTACCAATATTACAAGTCTTCAGAAGGC
ACCTCTTCTGGATTGATCCCGACATCAGGCATTGATAACTCTGTTTGATTGTCACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E550963] | SGN-U562775 | Tomato 200607 | Build 2 | 21 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T351838 [Download] [View] | Facility Assigned ID: TUS54J14_T3 |
| Submitter: Koni | Sequencing Facility: Giovanni |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.909 | Expected Error Rate: 0.0314 | Quality Trim Threshold: 12.5 |
Working
