EST details — SGN-E551920
Search information |
Request: 551920 | Match: SGN-E551920 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C330609 | Clone name: cTSB-2-E17 |
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Library Name: cTSB | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: seed
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E551920 | Length: 349 bp (1201 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E551920 [] (trimmed)
GAAGGAAGCGGGATATAAATGTATCAGCATCCACTTATCCACGCAGTAAGATTCCTAAAGGAACTTTGCCTAACATGAAGAATGTCCCTGAAACA
GGAGGTGGTCTTTTGCTCCCACCTCAACTTACCGGAAGGAGCAATATTGTTACAGAAGACATCAGCAAGCTATTTCGGAAGAAGACCTCGTCTTA
GTTGCACACAGAGTAAGAGAATGAAGTCACTGTTGACCTAACTGTAGTTTAATTTCAGTGGATTCTGTATCAGATTTTAGTAAGAAATTGACAGA
AATGTTGTAAGATATTTGGTTATGTTGATACTAGGATGGCTATCAGCCGTTCTGGTTGTGTTTG
GGAGGTGGTCTTTTGCTCCCACCTCAACTTACCGGAAGGAGCAATATTGTTACAGAAGACATCAGCAAGCTATTTCGGAAGAAGACCTCGTCTTA
GTTGCACACAGAGTAAGAGAATGAAGTCACTGTTGACCTAACTGTAGTTTAATTTCAGTGGATTCTGTATCAGATTTTAGTAAGAAATTGACAGA
AATGTTGTAAGATATTTGGTTATGTTGATACTAGGATGGCTATCAGCCGTTCTGGTTGTGTTTG
Unigenes |
Current Unigene builds | |||||
[SGN-E551920] | SGN-U564080 | Tomato 200607 | Build 2 | 10 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T354380 [Download] [View] | Facility Assigned ID: ctsb2e17 |
Submitter: Koni | Sequencing Facility: Cornell |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.928 | Expected Error Rate: 0.0054 | Quality Trim Threshold: 14.5 |